Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 AL627311.1-201ENST00000431514 115 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 NIPA2P5-201ENST00000452282 464 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AL583843.1-201ENST00000456070 346 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 RPS26P21-201ENST00000475397 348 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC092436.1-201ENST00000506450 503 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC112206.3-201ENST00000514578 389 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 SNORA40.12-201ENST00000516329 111 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 Y_RNA.693-201ENST00000516641 110 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 RN7SKP219-201ENST00000516825 296 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC107016.2-201ENST00000547968 190 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 HMGB1P33-201ENST00000563485 527 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC004492.1-201ENST00000607036 742 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 U4.5-201ENST00000617137 123 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 AC006020.1-201ENST00000420179 1854 ntBASIC3.24□□□□□ -1.89
HERVK_113Q902F9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.24□□□□□ -1.89
HERVK_113Q902F9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 HSPA8P4-201ENST00000511877 1920 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 MIR196B-201ENST00000384852 84 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 RNU6-192P-201ENST00000391253 100 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 CALM2P3-201ENST00000400429 449 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AL606923.1-201ENST00000406616 190 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 ATG3P1-201ENST00000419507 911 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 MTCYBP8-201ENST00000422855 651 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 GTF2IP20-201ENST00000431663 360 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AC016691.1-201ENST00000441321 413 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 HMGN2P10-201ENST00000448085 265 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AC021739.1-201ENST00000559631 174 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AP001596.2-201ENST00000608410 312 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 AC091903.1-201ENST00000624322 454 ntBASIC3.23□□□□□ -1.89
HERVK_113Q902F9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HERVK_113Q902F9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AL139276.1-201ENST00000311910 1001 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC073325.2-201ENST00000339545 159 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 RNU6-166P-201ENST00000384371 107 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 RNU6-434P-201ENST00000384376 107 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 MIR578-201ENST00000384828 96 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 RNU6-903P-201ENST00000391270 109 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC073415.1-201ENST00000449240 153 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AL118520.1-201ENST00000450770 291 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AL441985.1-201ENST00000457727 251 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 SNORD109B-201ENST00000458961 67 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 SNORD109A-201ENST00000459128 67 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC022493.1-201ENST00000492984 337 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 RNU4-29P-201ENST00000515943 174 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 SNORD19.2-201ENST00000516978 73 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AL137161.1-201ENST00000532231 390 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 HIF1AP1-201ENST00000553642 175 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC234778.2-201ENST00000566241 354 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC025678.1-201ENST00000567861 338 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC007151.1-201ENST00000572774 483 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC093788.1-201ENST00000609356 927 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 Z82243.1-201ENST00000609432 473 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.22□□□□□ -1.89
HERVK_113Q902F9 AC068792.1-201ENST00000621354 417 ntBASIC3.22□□□□□ -1.89
HERVK_113Q902F9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.21□□□□□ -1.9
HERVK_113Q902F9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.21□□□□□ -1.9
HERVK_113Q902F9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HERVK_113Q902F9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms