Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-701P-201ENST00000384059 107 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 SNORD115.1-201ENST00000391109 76 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL591034.1-201ENST00000407447 340 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL049714.1-201ENST00000466686 347 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 DEFB108D-201ENST00000527787 222 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AP002748.2-201ENST00000528671 348 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC121334.2-201ENST00000605387 271 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AP002826.1-201ENST00000608835 315 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC006338.1-201ENST00000618453 749 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.71□□□□□ -2.13
SHROOM3Q8TF72 AC009812.4-201ENST00000569134 1805 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 MTND4P4-201ENST00000439033 1366 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 Y_RNA.77-201ENST00000362962 107 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 RNU6-809P-201ENST00000384461 107 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 MIR1305-201ENST00000408300 86 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC090960.1-201ENST00000421072 306 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL356867.1-201ENST00000429623 299 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL049734.2-201ENST00000441066 616 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 Z96811.1-201ENST00000445880 108 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL590365.1-201ENST00000450788 243 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 MTND5P13-201ENST00000513046 1079 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 MTND2P38-201ENST00000522536 667 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 MTND4LP18-201ENST00000526864 291 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC123904.2-201ENST00000548059 300 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC109446.2-201ENST00000567872 497 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC068276.1-201ENST00000605793 379 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC135507.1-201ENST00000607214 561 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC095038.3-201ENST00000634439 195 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AC092104.1-201ENST00000497346 1441 ntBASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
SHROOM3Q8TF72 RNU6-195P-201ENST00000411352 109 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 TAAR7P-201ENST00000436141 242 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RPS24P1-201ENST00000438550 371 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 Z82210.1-201ENST00000440037 231 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 PGBD4P3-201ENST00000440731 581 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 BMI1P1-201ENST00000445879 941 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 HMGN2P16-201ENST00000456802 261 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AP000797.1-201ENST00000478870 387 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC093534.1-201ENST00000504977 132 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 CBX3P3-201ENST00000508108 532 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU6-678P-201ENST00000516832 109 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 OSBPL9P5-201ENST00000542581 171 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 ROCK1P1-201ENST00000573767 549 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MIR3913-1-201ENST00000577744 102 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC002545.1-201ENST00000592511 181 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC011939.3-201ENST00000613686 466 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MTND5P33-201ENST00000571250 1450 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MTND5P35-201ENST00000557537 1720 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC005832.2-201ENST00000538921 1430 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 FGF7P2-201ENST00000332473 296 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 MIR96-201ENST00000362288 78 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU6-223P-201ENST00000362830 107 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU5E-8P-201ENST00000363502 116 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU4-1-201ENST00000363925 141 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU6-53P-201ENST00000365367 106 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU1-39P-201ENST00000383897 165 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-2-201ENST00000384274 95 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 SNORD116-6-201ENST00000384711 96 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 RNU4-72P-201ENST00000410754 173 ntBASIC1.7□□□□□ -2.14
SHROOM3Q8TF72 AC009518.2-201ENST00000418056 731 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms