Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 RPL39P36-201ENST00000490784 156 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC116655.1-201ENST00000508324 901 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 ACA59.2-201ENST00000517061 156 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC009902.1-201ENST00000519351 183 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC084851.1-201ENST00000529105 249 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC010928.2-201ENST00000588017 287 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AL358072.1-201ENST00000604156 575 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 ELOCP5-201ENST00000604924 333 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC009318.2-201ENST00000610917 651 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC084768.2-201ENST00000622736 221 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC106858.1-201ENST00000637497 429 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 AC099786.3-201ENST00000565735 1410 ntBASIC1.64□□□□□ -2.15
CLHC1Q8NHS4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 RNU6-1280P-201ENST00000365211 107 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 MIR518D-201ENST00000385014 87 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 MIR29C-201ENST00000385231 88 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 RNU6-1000P-201ENST00000391066 106 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 RNU6-817P-201ENST00000391083 104 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 RNA5SP465-201ENST00000391195 109 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC006512.1-201ENST00000468816 291 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC116353.3-201ENST00000511215 249 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 RNA5SP182-201ENST00000516064 82 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 RNU5B-3P-201ENST00000516601 115 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 DEFB108A-201ENST00000530110 222 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 OR5B19P-201ENST00000531766 928 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC022880.1-201ENST00000534017 973 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 MIR4524B-201ENST00000581569 115 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC112220.3-201ENST00000605502 502 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC099654.9-201ENST00000637055 678 ntBASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLHC1Q8NHS4 AC138393.1-203ENST00000327086 343 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 RNU1-23P-201ENST00000363361 144 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 RNU5A-8P-201ENST00000364102 114 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 SNORD116.1-201ENST00000365628 92 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 MIR583-201ENST00000384846 75 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 SNORA40.4-201ENST00000390971 128 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 RNU6-1140P-201ENST00000410517 106 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC023194.1-201ENST00000493084 308 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AK6P1-201ENST00000540219 478 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 BNIP3P27-201ENST00000599991 412 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC021646.1-201ENST00000605469 484 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 RNU6-88P-201ENST00000606801 100 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC034229.4-201ENST00000607861 441 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC090970.3-201ENST00000612566 866 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AC099842.1-201ENST00000619919 596 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 AL136313.1-201ENST00000624804 202 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 U6.99-201ENST00000637524 83 ntBASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CLHC1Q8NHS4 SNORD115-3-201ENST00000363100 82 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 Y_RNA.465-201ENST00000384293 102 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 HMGN2P3-201ENST00000433603 273 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 HMGN2P5-201ENST00000436882 273 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC108059.3-201ENST00000456388 214 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 RNU1-98P-201ENST00000458992 160 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 BZW1P2-201ENST00000473537 826 ntBASIC1.61□□□□□ -2.15
CLHC1Q8NHS4 AC104982.1-201ENST00000478775 574 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms