Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 RNU7-95P-201ENST00000459222 64 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 snoU109.1-201ENST00000459339 135 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC117503.1-201ENST00000472241 394 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC108729.1-201ENST00000487812 947 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 HMGB1P35-201ENST00000503360 598 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 MTND2P31-201ENST00000512602 616 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC092451.2-201ENST00000538746 658 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 RPS3AP4-201ENST00000555161 764 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 SUB1P3-201ENST00000564581 315 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.6-201ENST00000603753 252 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.11-201ENST00000604059 253 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.10-201ENST00000604330 253 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC008162.1-201ENST00000604718 254 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.1-201ENST00000604752 252 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.2-201ENST00000604983 252 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.5-201ENST00000605253 252 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.4-201ENST00000605279 254 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.12-201ENST00000605291 253 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.8-201ENST00000605353 252 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.9-201ENST00000605428 253 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL670379.7-201ENST00000605823 252 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC034229.4-201ENST00000607861 441 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AC131235.4-201ENST00000609288 620 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
CLDND2Q8NHS1 CDC27P3-201ENST00000635418 1910 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 RNU6-188P-201ENST00000364207 107 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 RNU6-621P-201ENST00000364752 109 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 SNORA25B-201ENST00000365507 128 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 MIR561-201ENST00000385216 97 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AL133475.1-201ENST00000404414 305 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 RNA5SP450-201ENST00000411206 102 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC078974.1-201ENST00000411597 223 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AL449283.1-202ENST00000418249 604 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 HMGB1P31-201ENST00000437242 427 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 BRK1P2-201ENST00000442875 223 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 USP9YP10-201ENST00000454868 628 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC096745.1-201ENST00000509945 370 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 SNORA31.3-201ENST00000516029 96 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 RNU6-64P-201ENST00000517119 105 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC022880.1-201ENST00000534017 973 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 DUXAP1-201ENST00000556632 463 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC015720.1-201ENST00000565251 277 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 MTND4LP25-201ENST00000570218 163 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 MIR4782-201ENST00000577987 79 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC243960.4-201ENST00000600532 288 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC245297.2-201ENST00000610119 565 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 MIR6134-201ENST00000617606 109 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AC138627.2-201ENST00000624202 601 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 AL136313.1-201ENST00000624804 202 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 LINC02211-204ENST00000642024 1070 ntBASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CLDND2Q8NHS1 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 MTND5P10-201ENST00000603719 1809 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 MIR95-201ENST00000385072 81 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 MIR1323-201ENST00000408090 73 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 RNU6-321P-201ENST00000410912 106 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 MTND6P13-201ENST00000443510 523 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 RPL23AP6-201ENST00000446637 472 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC055855.1-201ENST00000489563 579 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC016550.1-201ENST00000505348 785 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC079395.1-201ENST00000510981 262 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC109445.1-201ENST00000512356 383 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC087441.2-201ENST00000529141 262 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 OR5AL2P-201ENST00000532185 920 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 LINC00933-203ENST00000559812 219 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC092953.2-201ENST00000608000 699 ntBASIC1.29□□□□□ -2.2
CLDND2Q8NHS1 AC106052.1-201ENST00000608029 497 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms