Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL513124.1-201ENST00000450410 614 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNU6-1088P-201ENST00000516850 104 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNA5SP454-201ENST00000517231 127 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC087854.1-201ENST00000519706 414 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC007151.1-201ENST00000572774 483 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC044792.1-201ENST00000593294 196 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC006557.5-201ENST00000603126 811 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AC048347.1-201ENST00000624621 427 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.09□□□□□ -1.76
SMC1BQ8NDV3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.09□□□□□ -1.76
SMC1BQ8NDV3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 RNU6-266P-201ENST00000364225 107 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 MIR548K-201ENST00000408406 116 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 MIR548F5-201ENST00000408421 86 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 NDUFB4P6-201ENST00000436819 366 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 HMGN2P7-201ENST00000456186 273 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 RNU7-170P-201ENST00000459303 61 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 RN7SL93P-201ENST00000463035 293 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC117503.1-201ENST00000472241 394 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 MTND3P25-201ENST00000509243 135 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 ZNF192P1-203ENST00000565888 810 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC138761.3-201ENST00000579993 334 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC002044.1-201ENST00000606707 158 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 MIR7843-201ENST00000622274 79 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AL031601.2-202ENST00000622650 282 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 AC090740.1-201ENST00000623193 2262 ntBASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SMC1BQ8NDV3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 RNU1-18P-201ENST00000363062 164 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 SNORD6-201ENST00000365444 73 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 RNU6-607P-201ENST00000411283 108 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 RPL37P10-201ENST00000412884 288 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 SAR1AP4-201ENST00000429225 591 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 CECR9-201ENST00000453421 199 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 MTND4P17-201ENST00000470444 350 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 RNU6-1231P-201ENST00000517185 103 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 GTF3AP2-201ENST00000557014 266 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 LRRC37A5P-203ENST00000580181 585 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AL050343.2-201ENST00000607338 280 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AL138726.1-201ENST00000614873 333 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 FAM157A-202ENST00000615155 405 ntBASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SMC1BQ8NDV3 IPO8P1-201ENST00000455509 3109 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 FAM35BP-202ENST00000497389 3337 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL049641.1-201ENST00000441055 1948 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RNU6-562P-201ENST00000362731 107 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RNU6-1303P-201ENST00000364841 107 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 SNORD116-11-201ENST00000383882 92 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RNU6-1297P-201ENST00000384415 104 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL391417.1-201ENST00000404100 426 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RNU2-68P-201ENST00000410878 191 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 RN7SKP53-201ENST00000411337 315 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 AL353621.1-201ENST00000418219 243 ntBASIC4.06□□□□□ -1.76
SMC1BQ8NDV3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms