Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 SNORD62.1-201ENST00000362541 86 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-266P-201ENST00000364225 107 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RNA5SP167-201ENST00000365461 116 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-76P-201ENST00000384060 104 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.527-201ENST00000384573 102 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.557-201ENST00000384680 107 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.645-201ENST00000391229 102 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC080125.1-201ENST00000414888 684 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC008267.5-201ENST00000424928 265 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC006028.1-201ENST00000438379 402 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RPL21P103-201ENST00000479921 488 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-470P-201ENST00000515954 104 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RNA5SP384-201ENST00000516615 116 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 RNU1-54P-201ENST00000517181 120 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC010653.1-201ENST00000571108 881 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 LARP7P3-201ENST00000579888 337 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 BNIP3P16-201ENST00000589779 534 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AC002044.1-201ENST00000606707 158 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AL161423.1-201ENST00000613700 262 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 U7.8-201ENST00000619968 63 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 AL162373.1-201ENST00000620433 407 ntBASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SLC44A3Q8N4M1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.153-201ENST00000363615 91 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 SNORA36C-201ENST00000384289 132 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-306P-201ENST00000384617 107 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 HMGN2P8-201ENST00000391458 268 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 Z99755.1-201ENST00000414048 380 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 MTCYBP10-201ENST00000424905 650 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 MTATP6P4-201ENST00000427725 675 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 USP9YP30-201ENST00000430729 455 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AL591212.2-201ENST00000433923 257 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 Z75741.1-201ENST00000446793 314 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AL360271.2-201ENST00000447710 161 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 SNORD108-201ENST00000459332 71 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 RPL21P41-201ENST00000459863 264 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC096745.1-201ENST00000509945 370 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-120P-201ENST00000516077 103 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-699P-201ENST00000517081 110 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC087854.1-201ENST00000519706 414 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC025423.5-201ENST00000550230 219 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC026371.1-201ENST00000551867 419 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 MIR5004-201ENST00000579078 107 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 MIR15A-201ENST00000607334 83 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 PISRT1.1-201ENST00000616930 107 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 Z69720.2-201ENST00000624755 279 ntBASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC44A3Q8N4M1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 AC009812.4-201ENST00000569134 1805 ntBASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 AC138393.1-203ENST00000327086 343 ntBASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-490P-201ENST00000362985 107 ntBASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 RNU1-115P-201ENST00000365329 160 ntBASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 MT-TG-201ENST00000387429 68 ntBASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 RNU6-837P-201ENST00000391056 108 ntBASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.59□□□□□ -1.83
SLC44A3Q8N4M1 RN7SKP111-201ENST00000410349 271 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms