Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL121821.2-201ENST00000556081 394 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AC138761.3-201ENST00000579993 334 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 MIR5692A1-201ENST00000580523 69 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 MIR5692C1-201ENST00000585309 91 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AC098826.3-201ENST00000603823 466 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL627309.6-201ENST00000606857 840 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AC126177.8-201ENST00000618339 1015 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL359757.2-201ENST00000624309 274 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 MTND4LP32-201ENST00000636111 270 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 Z99571.1-201ENST00000636677 394 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 AL161912.2-201ENST00000565707 3007 ntBASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLIP4Q8N3C7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLIP4Q8N3C7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1167P-201ENST00000363227 94 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 SNORA51.4-201ENST00000364993 124 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLIP4Q8N3C7 RPL37P10-201ENST00000412884 288 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC063979.1-201ENST00000415539 377 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 NDUFB4P7-201ENST00000423198 363 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 RPL31P60-201ENST00000478450 367 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 RNA5SP217-201ENST00000515959 91 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1256P-201ENST00000516539 103 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 COPS8P3-201ENST00000526024 482 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AP005597.4-201ENST00000526762 229 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AL442663.2-201ENST00000554385 511 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC007151.1-201ENST00000572774 483 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 MIR4276-201ENST00000584832 70 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC023043.2-201ENST00000589678 1026 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AL138726.1-201ENST00000614873 333 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC084781.2-201ENST00000615568 161 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 AL512643.1-201ENST00000635735 524 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3□□□□□ -1.93
CLIP4Q8N3C7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CLIP4Q8N3C7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
CLIP4Q8N3C7 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 SNORA63-201ENST00000363450 132 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.212-201ENST00000364177 102 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1297P-201ENST00000384415 104 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 PTMAP2-201ENST00000397627 327 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RNU6-1304P-201ENST00000411374 106 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 BMS1P22-201ENST00000414726 313 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RPL32P35-201ENST00000415214 394 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 MTCO2P27-201ENST00000420740 428 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL139396.1-201ENST00000421137 167 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL356867.1-201ENST00000429623 299 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RPL32P28-201ENST00000443577 397 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC104472.2-201ENST00000469035 601 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC087884.1-201ENST00000469738 328 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC117503.1-201ENST00000472241 394 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RPS27P27-201ENST00000498779 255 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 MTND5P5-201ENST00000503764 376 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 SUMO2P6-201ENST00000505273 288 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 Y_RNA.718-201ENST00000517110 102 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 RNU6-323P-201ENST00000521915 107 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AP005639.2-201ENST00000527592 928 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 CYCSP27-201ENST00000527643 293 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 U3.45-201ENST00000607547 219 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC107294.1-201ENST00000609524 467 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AL133215.3-201ENST00000609801 448 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 FAM157A-202ENST00000615155 405 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC034229.5-201ENST00000624258 185 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC091903.1-201ENST00000624322 454 ntBASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLIP4Q8N3C7 AF117829.1-206ENST00000621883 3802 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms