Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 EEF1A1P41-201ENST00000414667 207 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC138393.2-201ENST00000414742 246 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AL669831.1-202ENST00000428504 417 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 GPM6BP2-201ENST00000432046 144 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AL512844.2-201ENST00000433990 593 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC092573.2-201ENST00000434546 243 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 GTF2IP13-201ENST00000438487 386 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 GPM6BP1-201ENST00000446387 144 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MTND4P18-201ENST00000447010 465 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 RPS15AP27-201ENST00000449183 343 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 HMGN2P26-201ENST00000463169 339 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 TRBV1-201ENST00000476502 284 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 CCDC34P1-201ENST00000507441 517 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 LRRC34P2-201ENST00000514850 553 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 SNORA20.3-201ENST00000516880 132 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MTND4P7-201ENST00000523876 130 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MTCO3P23-201ENST00000561363 289 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AMZ2P1-203ENST00000565833 850 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MIR5583-1-201ENST00000580941 59 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 RNU6-89P-201ENST00000606519 100 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MIR6076-201ENST00000617521 113 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AP003122.5-201ENST00000527668 3766 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC091564.4-201ENST00000533934 2194 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RNU6-522P-201ENST00000364497 107 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 U3.12-201ENST00000364498 214 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 Y_RNA.303-201ENST00000364998 94 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 MIR301A-201ENST00000385261 86 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 MT-TL1-201ENST00000386347 75 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 SNORD67-201ENST00000390833 111 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RNA5SP111-201ENST00000411386 101 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 ERLEC1P1-201ENST00000433806 578 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 SCARNA18-201ENST00000459004 134 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RNA5SP310-201ENST00000459084 116 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RPL21P41-201ENST00000459863 264 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RPS15AP34-201ENST00000487776 387 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC009901.1-201ENST00000506703 541 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RNU6-143P-201ENST00000516942 93 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 SNORA31.26-201ENST00000517250 137 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC078814.3-201ENST00000553036 491 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 MIR548S-201ENST00000581352 82 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 RPL12P50-201ENST00000603116 116 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AL138880.2-201ENST00000616214 239 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 AL512643.1-201ENST00000635735 524 ntBASIC3.3□□□□□ -1.88
VPS52Q8N1B4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS52Q8N1B4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 RNU6-82P-201ENST00000363970 107 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 RNA5SP139-201ENST00000364340 117 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 Y_RNA.399-201ENST00000383955 105 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 SNORA1.3-201ENST00000384676 136 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AL356776.1-201ENST00000406574 447 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 ARL5AP1-201ENST00000418991 388 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AL353572.1-201ENST00000442490 417 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 RPL21P99-201ENST00000480369 423 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AC104136.1-201ENST00000512969 394 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 BNIP3P6-201ENST00000549284 499 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AL118558.2-201ENST00000556294 238 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AL157871.3-201ENST00000557231 293 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 HMGB1P14-201ENST00000557424 591 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS52Q8N1B4 MIR1273C-201ENST00000578669 77 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 MIR4672-201ENST00000583126 81 ntBASIC3.29□□□□□ -1.88
VPS52Q8N1B4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms