Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-572P-201ENST00000516724 80 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AP002963.1-201ENST00000530590 184 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AP000889.1-201ENST00000530968 660 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AL391840.1-201ENST00000571144 367 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC073648.5-201ENST00000603502 305 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 Z84480.1-201ENST00000605131 311 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC126118.1-201ENST00000607744 628 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AL589743.7-201ENST00000612637 233 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC091834.1-201ENST00000614543 472 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC009090.3-201ENST00000616553 565 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AC016717.2-201ENST00000609089 5141 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 ADAM3A-203ENST00000461344 2157 ntBASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
C9orf40Q8IXQ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 MTND5P17-201ENST00000418405 1603 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 DEFB108C-201ENST00000400154 252 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 FO393413.1-201ENST00000402892 195 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 RNA5SP111-201ENST00000411386 101 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 USP9YP6-201ENST00000413550 854 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC096649.2-201ENST00000416186 393 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AL160275.3-201ENST00000423876 471 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC007560.1-201ENST00000426912 237 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 MTCO3P5-201ENST00000433620 714 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 HMGN2P10-201ENST00000448085 265 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 MTND1P29-201ENST00000448112 647 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 SEM1P1-201ENST00000506694 209 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 SNORA31.19-201ENST00000517079 126 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 RANP3-201ENST00000530970 276 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 OR5BN1P-201ENST00000532955 829 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC021739.1-201ENST00000559631 174 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 MIR4782-201ENST00000577987 79 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC008521.1-201ENST00000587471 187 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC048344.4-201ENST00000619744 527 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 AC010889.1-201ENST00000566193 2666 ntBASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
C9orf40Q8IXQ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 RNU6-395P-201ENST00000365662 106 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 RNU6-1119P-201ENST00000384349 108 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AL356057.2-201ENST00000403318 432 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 RNU6-387P-201ENST00000411331 105 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AL365338.1-201ENST00000422282 858 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 RN7SL636P-201ENST00000497504 294 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC098591.2-201ENST00000510152 315 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 OR5AL2P-201ENST00000532185 920 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 GLYCAM1-201ENST00000546596 285 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AL512310.1-201ENST00000548639 172 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC006199.1-201ENST00000548728 219 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 MIR5194-201ENST00000582634 120 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 DEFB131E-202ENST00000602581 683 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AL022154.1-201ENST00000604698 785 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AL670379.4-201ENST00000605279 254 ntBASIC2.21□□□□□ -2.06
C9orf40Q8IXQ3 AC080013.6-201ENST00000606185 215 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms