Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 OR4R1P-201ENST00000529879 463 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC021269.2-201ENST00000532318 330 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 NDUFA8P1-201ENST00000605525 367 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC064807.4-201ENST00000607201 407 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 DUSP12P1-201ENST00000612874 516 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AL359547.2-201ENST00000615810 418 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC136475.10-201ENST00000620253 385 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC138649.3-201ENST00000622154 254 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC064859.1-201ENST00000624741 174 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 MIR1291-201ENST00000627649 87 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AL157786.1-207ENST00000627771 695 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC016717.2-201ENST00000609089 5141 ntBASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CCDC60Q8IWA6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 SNORA4.3-201ENST00000365564 137 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 Y_RNA.534-201ENST00000384599 112 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 GSTA9P-201ENST00000406231 611 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 SNORA3.2-201ENST00000408221 125 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 RNU4-53P-201ENST00000410828 140 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 RNA5SP111-201ENST00000411386 101 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 USP9YP6-201ENST00000413550 854 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 BX682237.1-201ENST00000415016 335 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 SKA2P1-201ENST00000425592 390 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC073464.1-201ENST00000429823 534 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC132479.1-201ENST00000449160 144 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 RPL23AP70-201ENST00000483361 460 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC114786.4-201ENST00000508771 728 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 RNA5SP24-201ENST00000516478 95 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC103810.1-201ENST00000579873 453 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC007938.3-201ENST00000604965 623 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AL670379.4-201ENST00000605279 254 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 AC009161.2-201ENST00000624626 138 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 U6.114-201ENST00000636407 96 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 MTND4P35-201ENST00000604257 1375 ntBASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CCDC60Q8IWA6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RNU6-623P-201ENST00000363143 105 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 SNORA25.6-201ENST00000364121 118 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RNU6-658P-201ENST00000384606 106 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 MIR301A-201ENST00000385261 86 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL096701.2-201ENST00000416920 238 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 MORF4L1P6-201ENST00000418771 268 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL353729.1-201ENST00000425044 720 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL365496.1-201ENST00000426885 215 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC010975.2-201ENST00000427781 588 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RPS29P15-201ENST00000458329 171 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC006512.1-201ENST00000468816 291 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC079382.1-201ENST00000493346 557 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RPS27AP10-201ENST00000496103 208 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC109927.2-201ENST00000506416 303 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RNU6-1315P-201ENST00000517187 99 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AP003072.2-201ENST00000527756 676 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC084851.1-201ENST00000529105 249 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RANP3-201ENST00000530970 276 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL359212.1-201ENST00000556608 614 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC010546.1-201ENST00000569391 485 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 DEFB131E-202ENST00000602581 683 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC008536.2-201ENST00000607284 349 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC126118.1-201ENST00000607744 628 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC007684.1-201ENST00000609671 477 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 HULC.1-201ENST00000612720 240 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 CKAP2P1-201ENST00000555477 2049 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 AC103710.2-202ENST00000641454 2853 ntBASIC2.67□□□□□ -1.98
CCDC60Q8IWA6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC60Q8IWA6 RNU1-73P-201ENST00000383971 164 ntBASIC2.66□□□□□ -1.98
CCDC60Q8IWA6 RNU6-259P-201ENST00000383999 107 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms