Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 MIR4528-201ENST00000577763 90 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 HMGN2P15-201ENST00000585707 270 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AL645944.1-201ENST00000603857 493 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 MTND4LP5-201ENST00000605152 292 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AL451064.1-201ENST00000607718 471 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AC006566.1-201ENST00000608943 513 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 AL133173.2-201ENST00000614270 90 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.86□□□□□ -1.95
NPHP3Q7Z494 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
NPHP3Q7Z494 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AC138915.1-201ENST00000565427 1685 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 RNU6-1284P-201ENST00000363701 100 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AL139397.2-201ENST00000404529 772 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 BTF3L4P3-201ENST00000418879 476 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AL118520.1-201ENST00000450770 291 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 RBM43P1-201ENST00000476891 1081 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 SUMO2P6-201ENST00000505273 288 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 MIR3611-201ENST00000584484 83 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AL355877.2-201ENST00000603670 358 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 AL137847.3-201ENST00000611521 109 ntBASIC2.85□□□□□ -1.95
NPHP3Q7Z494 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHP3Q7Z494 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.84□□□□□ -1.95
NPHP3Q7Z494 ZNF519P1-201ENST00000449011 1626 ntBASIC2.84□□□□□ -1.95
NPHP3Q7Z494 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
NPHP3Q7Z494 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
NPHP3Q7Z494 RNU6-188P-201ENST00000364207 107 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 RNU1-51P-201ENST00000365345 176 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 NDUFS5P1-201ENST00000405668 289 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 CDK8P2-201ENST00000415020 547 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 ELOCP4-201ENST00000420090 333 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 GTF2IP20-201ENST00000431663 360 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AL160314.1-201ENST00000490836 438 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AC022616.3-201ENST00000523940 148 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AC110588.1-201ENST00000559699 137 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AC010546.1-201ENST00000569391 485 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 MIR3167-201ENST00000579623 85 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AC064872.1-201ENST00000604823 1072 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 FTX_3.1-201ENST00000610451 147 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 AC008498.1-201ENST00000613012 531 ntBASIC2.84□□□□□ -1.96
NPHP3Q7Z494 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 SNORD56.2-201ENST00000363242 71 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 RNU6-884P-201ENST00000363889 107 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 Y_RNA.318-201ENST00000365131 97 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 Y_RNA.436-201ENST00000384097 102 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 RNU6-39P-201ENST00000384344 107 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AL139156.1-201ENST00000412785 841 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 VN1R108P-201ENST00000431580 830 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 RPS15AP27-201ENST00000449183 343 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 MTCO2P18-201ENST00000457151 658 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC114786.4-201ENST00000508771 728 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 MRPS36P2-201ENST00000512569 299 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 RNA5SP290-201ENST00000517133 127 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AP006587.4-201ENST00000526053 529 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC012213.3-201ENST00000577199 777 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC005498.1-201ENST00000592125 465 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC103591.3-201ENST00000608684 209 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.83□□□□□ -1.96
NPHP3Q7Z494 FARSBP1-201ENST00000435808 1778 ntBASIC2.83□□□□□ -1.96
NPHP3Q7Z494 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
NPHP3Q7Z494 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms