Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13CQ709C8 AP002791.1-201ENST00000623291 381 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 SNORA4.1-201ENST00000364263 144 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 SNORA29-201ENST00000384183 140 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 SNORA1.3-201ENST00000384676 136 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13CQ709C8 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC-0.03□□□□□ -2.41
VPS13CQ709C8 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC-0.03□□□□□ -2.41
VPS13CQ709C8 AC010683.1-201ENST00000473673 378 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 ACA64.5-201ENST00000516207 127 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 OR5AK1P-201ENST00000524837 922 ntBASIC-0.03□□□□□ -2.41
VPS13CQ709C8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 PGBD4P5-201ENST00000445958 426 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AC008562.1-201ENST00000521763 330 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 SNORD18A-201ENST00000363753 72 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 COX6CP6-201ENST00000490840 228 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 RNU6-138P-201ENST00000515952 107 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AL645638.1-201ENST00000440519 361 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC-0.04□□□□□ -2.42
VPS13CQ709C8 SCARNA8-201ENST00000515924 131 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 MIR8064-201ENST00000612863 90 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AC015726.3-201ENST00000624501 418 ntBASIC-0.04□□□□□ -2.42
VPS13CQ709C8 AC023934.1-201ENST00000574529 2389 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS13CQ709C8 SNORD57-201ENST00000448188 72 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
VPS13CQ709C8 RNU7-40P-201ENST00000516397 64 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 AC136619.2-201ENST00000563361 631 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 MIR4764-201ENST00000580680 88 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 CENPF-206ENST00000614578 528 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS13CQ709C8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC-0.05□□□□□ -2.42
VPS13CQ709C8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
VPS13CQ709C8 RNU6-674P-201ENST00000363831 107 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 DDX3P2-201ENST00000446138 111 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 RAC1P9-201ENST00000604990 392 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 RPS3AP24-201ENST00000407896 734 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 ZNF863P-201ENST00000426746 417 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 RNA5SP134-201ENST00000516492 96 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.05□□□□□ -2.42
VPS13CQ709C8 AC069114.2-201ENST00000604699 304 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 AC068880.5-201ENST00000624331 290 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 OR5AK4P-201ENST00000635912 903 ntBASIC-0.05□□□□□ -2.42
VPS13CQ709C8 RNU6-26P-201ENST00000383985 107 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RNA5SP105-201ENST00000391123 113 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RNA5SP212-201ENST00000391223 107 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS13CQ709C8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS13CQ709C8 OR52A4P-202ENST00000481634 799 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RPL30P11-201ENST00000495304 339 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AC067838.1-201ENST00000606064 577 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AC100812.1-201ENST00000607622 580 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RNU1-105P-201ENST00000363470 161 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RPL21P32-201ENST00000419877 477 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AL354941.1-201ENST00000438600 464 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AC009950.2-201ENST00000636548 183 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 MIR518A1-201ENST00000385068 85 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RNA5SP496-201ENST00000391240 109 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AC096920.1-201ENST00000423991 241 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 HMGN2P34-201ENST00000437647 269 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 SCARNA16.2-201ENST00000516520 172 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AC034114.1-201ENST00000520293 285 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 AL355297.3-201ENST00000604082 446 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 MIR7515-201ENST00000637837 67 ntBASIC-0.06□□□□□ -2.42
VPS13CQ709C8 RNU6-1155P-201ENST00000363554 107 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 RPS26P5-201ENST00000418544 335 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13CQ709C8 MTCYBP16-201ENST00000509187 1129 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13CQ709C8 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AL133373.1-201ENST00000497098 94 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 RN7SKP12-201ENST00000516275 143 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AC004492.1-201ENST00000607036 742 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 SETP11-201ENST00000473027 690 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 NCOR1P1-202ENST00000486162 291 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AC022493.2-201ENST00000506122 481 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 IGJP1-201ENST00000522682 475 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AP003122.4-201ENST00000530980 758 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 AL136520.1-202ENST00000555494 763 ntBASIC-0.07□□□□□ -2.42
VPS13CQ709C8 COX6CP3-201ENST00000580869 223 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms