Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 SMURF2P1-201ENST00000514992 481 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 RNU4-57P-201ENST00000515980 135 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 RNA5SP165-201ENST00000517142 115 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AP003327.1-201ENST00000529684 127 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC010615.3-201ENST00000597319 394 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 RPL21P136-201ENST00000605378 396 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AC006001.4-201ENST00000622243 395 ntBASIC0.37□□□□□ -2.35
CSPG4Q6UVK1 AL359854.1-201ENST00000614203 1594 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 SNORD95.1-201ENST00000364099 68 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 RNU1-96P-201ENST00000364163 162 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 SNORA4.3-201ENST00000365564 137 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MIR325-201ENST00000385260 98 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 RNU11-3P-201ENST00000391111 133 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC009310.1-201ENST00000414414 451 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 BEND7P1-201ENST00000422058 457 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 Z82210.1-201ENST00000440037 231 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC134050.1-201ENST00000495088 933 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MIR892C-201ENST00000516410 77 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AL356432.3-201ENST00000568952 465 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC011260.1-201ENST00000578420 472 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MZT1P2-201ENST00000604387 248 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AL138963.2-201ENST00000605137 226 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC012676.2-201ENST00000619258 186 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC087821.2-201ENST00000637086 450 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MTND5P31-201ENST00000419366 1374 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 RNU6-700P-201ENST00000391043 107 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MTCO2P20-201ENST00000437339 673 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AL358794.1-201ENST00000445689 381 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC104629.2-201ENST00000468627 598 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC109927.2-201ENST00000506416 303 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 SNORA14.1-201ENST00000516113 141 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC005668.1-201ENST00000571142 476 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MIR3126-201ENST00000577443 74 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 MIR4713-201ENST00000582691 75 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AL139344.1-201ENST00000605228 195 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AL138478.1-201ENST00000612252 832 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 AL589743.7-201ENST00000612637 233 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 FRG1HP-204ENST00000617940 757 ntBASIC0.36□□□□□ -2.35
CSPG4Q6UVK1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNU6-989P-201ENST00000362756 107 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 Y_RNA.457-201ENST00000384237 111 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNU6-939P-201ENST00000384634 107 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNU4-78P-201ENST00000410940 126 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AL589880.1-201ENST00000448271 287 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 HMGB1P35-201ENST00000503360 598 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC147055.4-201ENST00000504399 745 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC091435.1-201ENST00000505442 584 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 SNORA31.6-201ENST00000516241 130 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AL713866.2-201ENST00000603579 219 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC008945.2-201ENST00000606056 604 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC097372.5-201ENST00000623665 376 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNU1-58P-201ENST00000362413 163 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNU6-338P-201ENST00000383888 105 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 MIR608-201ENST00000384820 100 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNA5SP56-201ENST00000410277 118 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RNU2-63P-201ENST00000410792 194 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RPP40P1-201ENST00000426762 456 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 UBE2V2P3-201ENST00000433562 437 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 RPS15AP5-201ENST00000436276 388 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC006512.1-201ENST00000468816 291 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC104692.1-201ENST00000472406 90 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 HMGN2P9-201ENST00000476875 229 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 AP003973.1-201ENST00000604639 691 ntBASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.35□□□□□ -2.35
CSPG4Q6UVK1 uc_338.17-201ENST00000619633 179 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms