Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 Y_RNA.577-201ENST00000384794 101 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 MIR34A-201ENST00000385130 110 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
E4F1Q66K89 RNU6-823P-201ENST00000391042 103 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 NUP35P1-201ENST00000422734 947 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AL731563.1-201ENST00000442202 214 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AL645939.1-201ENST00000453429 797 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 U8.21-201ENST00000459536 136 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 FTH1P2-201ENST00000466086 412 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AC078817.1-201ENST00000492623 435 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AK3P2-201ENST00000507976 429 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
E4F1Q66K89 RNU6-475P-201ENST00000516073 104 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 SNORA31.9-201ENST00000516429 84 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 Y_RNA.687-201ENST00000516558 91 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.08□□□□□ -1.76
E4F1Q66K89 AC066616.2-201ENST00000559334 1481 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 CPDP1-201ENST00000579660 283 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.08□□□□□ -1.76
E4F1Q66K89 AL645944.1-201ENST00000603857 493 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.08□□□□□ -1.76
E4F1Q66K89 AC124312.5-201ENST00000604451 268 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 AL161629.2-201ENST00000615347 275 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 HMGB1P24-202ENST00000615653 685 ntBASIC4.08□□□□□ -1.76
E4F1Q66K89 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.08□□□□□ -1.76
E4F1Q66K89 AC007785.2-201ENST00000598627 1916 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
E4F1Q66K89 MIR372-201ENST00000362225 67 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 U1.1-201ENST00000384101 164 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 RNU6-166P-201ENST00000384371 107 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 MIR493-201ENST00000385254 89 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
E4F1Q66K89 SNORA40C-201ENST00000391285 128 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 AL078601.1-201ENST00000444542 271 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 AC092798.1-201ENST00000458542 409 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 RNU7-169P-201ENST00000459456 61 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 AC006463.2-201ENST00000473326 348 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 MRPS35P2-201ENST00000508242 191 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.07□□□□□ -1.76
E4F1Q66K89 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.07□□□□□ -1.76
E4F1Q66K89 RAB9BP1-201ENST00000519581 626 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.07□□□□□ -1.76
E4F1Q66K89 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
E4F1Q66K89 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.07□□□□□ -1.76
E4F1Q66K89 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 MIR4443-201ENST00000585052 53 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.07□□□□□ -1.76
E4F1Q66K89 AC244505.7-201ENST00000599675 272 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 VN1R107P-201ENST00000601784 209 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 MIR6758-201ENST00000620653 63 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 MIR6500-201ENST00000622700 86 ntBASIC4.07□□□□□ -1.76
E4F1Q66K89 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.07□□□□□ -1.76
E4F1Q66K89 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
E4F1Q66K89 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
E4F1Q66K89 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.07□□□□□ -1.76
E4F1Q66K89 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.06□□□□□ -1.76
E4F1Q66K89 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.06□□□□□ -1.76
E4F1Q66K89 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
E4F1Q66K89 Y_RNA.126-201ENST00000363382 111 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.06□□□□□ -1.76
E4F1Q66K89 RPS26P8-201ENST00000393490 348 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.06□□□□□ -1.76
E4F1Q66K89 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.06□□□□□ -1.76
E4F1Q66K89 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.06□□□□□ -1.76
E4F1Q66K89 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.06□□□□□ -1.76
E4F1Q66K89 Z82210.1-201ENST00000440037 231 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 OR2AQ1P-201ENST00000451972 200 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 AC112492.4-201ENST00000456549 352 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 snoU109.2-201ENST00000459316 135 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
E4F1Q66K89 MIR4284-201ENST00000578924 81 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 AL158827.2-201ENST00000602494 330 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 AL355598.1-201ENST00000604169 202 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 PRR13P7-201ENST00000605538 430 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.06□□□□□ -1.76
E4F1Q66K89 AC007792.1-201ENST00000623023 402 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.06□□□□□ -1.76
E4F1Q66K89 AL691447.3-201ENST00000635020 330 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 U6.99-201ENST00000637524 83 ntBASIC4.06□□□□□ -1.76
E4F1Q66K89 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.06□□□□□ -1.76
E4F1Q66K89 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
E4F1Q66K89 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.06□□□□□ -1.76
E4F1Q66K89 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
E4F1Q66K89 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.06□□□□□ -1.76
E4F1Q66K89 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.06□□□□□ -1.76
E4F1Q66K89 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
E4F1Q66K89 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.05□□□□□ -1.76
E4F1Q66K89 AC008669.1-201ENST00000565823 2178 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.05□□□□□ -1.76
E4F1Q66K89 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
E4F1Q66K89 RNA5SP42-201ENST00000364278 115 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 RN7SKP227-201ENST00000364445 330 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 SNORD14.1-201ENST00000365609 90 ntBASIC4.05□□□□□ -1.76
E4F1Q66K89 AP002088.1-201ENST00000382740 395 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms