Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RN7SKP104-201ENST00000362605 328 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 RNA5SP123-201ENST00000363244 119 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 Y_RNA.432-201ENST00000384087 111 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VARS2Q5ST30 RNA5SP31-201ENST00000411144 127 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.54□□□□□ -1.52
VARS2Q5ST30 RNU6-904P-201ENST00000516206 101 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 RNU1-104P-201ENST00000517280 175 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 AP004607.1-201ENST00000524456 203 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 AC099778.2-201ENST00000610904 211 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 IGLL4P-201ENST00000614590 133 ntBASIC5.54□□□□□ -1.52
VARS2Q5ST30 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.54□□□□□ -1.52
VARS2Q5ST30 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.54□□□□□ -1.52
VARS2Q5ST30 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VARS2Q5ST30 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARS2Q5ST30 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VARS2Q5ST30 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 Y_RNA.52-201ENST00000362760 96 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 RNU1-32P-201ENST00000363937 159 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 AL078599.1-201ENST00000402075 293 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 AL357515.1-201ENST00000402967 542 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 RN7SKP61-201ENST00000410642 295 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 RNU2-55P-201ENST00000411146 174 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 AC098614.2-201ENST00000426040 255 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 snoU13.20-201ENST00000459180 104 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 RPL23AP62-201ENST00000463396 453 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 AC010618.1-201ENST00000469924 477 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 AC021231.3-201ENST00000558497 370 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 MIR7853-201ENST00000584820 132 ntBASIC5.53□□□□□ -1.52
VARS2Q5ST30 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARS2Q5ST30 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARS2Q5ST30 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VARS2Q5ST30 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VARS2Q5ST30 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
VARS2Q5ST30 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 ABCC13-202ENST00000463099 3842 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 RNU1-140P-201ENST00000365040 165 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 RNA5SP455-201ENST00000365190 119 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 Y_RNA.361-201ENST00000365515 120 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 RNU6-1080P-201ENST00000383982 107 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 RN7SL459P-201ENST00000481078 302 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 AL049874.1-201ENST00000489560 388 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 RN7SKP260-201ENST00000516907 149 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 MIR5009-201ENST00000578736 100 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 AL356575.1-201ENST00000603008 283 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 IL33-202ENST00000417746 2327 ntTSL 2 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 AC010329.2-201ENST00000595195 2737 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 AC073073.2-201ENST00000609827 2578 ntBASIC5.52□□□□□ -1.53
VARS2Q5ST30 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.52□□□□□ -1.53
VARS2Q5ST30 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VARS2Q5ST30 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VARS2Q5ST30 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 Y_RNA.73-201ENST00000362910 113 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 RN7SKP153-201ENST00000365026 316 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 MIR549A-201ENST00000385268 96 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 Y_RNA.587-201ENST00000391210 103 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 RPS16P5-201ENST00000406501 404 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 AL590139.1-201ENST00000416267 400 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 CYCSP10-201ENST00000417973 294 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.51□□□□□ -1.53
VARS2Q5ST30 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 RPS20P22-201ENST00000473700 357 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 AL132838.2-201ENST00000492041 314 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 AP006289.1-201ENST00000538089 277 ntBASIC5.51□□□□□ -1.53
VARS2Q5ST30 MIR4691-201ENST00000583764 85 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms