Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AL670379.4-201ENST00000605279 254 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 ATP1B3P1-201ENST00000605365 821 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC090115.4-201ENST00000609970 188 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC012409.4-201ENST00000612923 249 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC007998.5-201ENST00000622938 237 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC022140.2-201ENST00000623500 188 ntBASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TTC39AQ5SRH9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC008264.2-201ENST00000610193 3731 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 OR4G2P-202ENST00000641004 1759 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 RPL9P7-201ENST00000330965 580 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 RNU6-116P-201ENST00000384042 109 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MIR514A2-201ENST00000385131 88 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MIR514A3-201ENST00000385132 88 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 RNU6-550P-201ENST00000391057 101 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 OR6C66P-201ENST00000414917 930 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AL451074.5-201ENST00000415894 435 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC236972.1-201ENST00000433225 199 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC244505.4-201ENST00000434905 287 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 SSXP5-201ENST00000443473 287 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC092001.1-201ENST00000453012 261 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 RPL23AP31-201ENST00000456160 467 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MTCO3P9-201ENST00000506989 781 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC098591.2-201ENST00000510152 315 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC107953.1-201ENST00000522216 297 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC243972.3-201ENST00000539655 198 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AL118558.2-201ENST00000556294 238 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MIR4424-201ENST00000585257 86 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC091135.1-201ENST00000585943 307 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AP001486.3-201ENST00000615334 372 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AC099654.5-201ENST00000636479 350 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 MIR4275-201ENST00000636486 87 ntBASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.39□□□□□ -1.87
TTC39AQ5SRH9 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 RNU6-694P-201ENST00000364071 147 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 RNU1-112P-201ENST00000364401 164 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 RNU6-190P-201ENST00000384154 102 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL138827.1-201ENST00000402666 306 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 EEF1A1P40-201ENST00000412883 573 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL513043.1-201ENST00000439124 535 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL590639.1-201ENST00000456484 337 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 MTND1P11-201ENST00000456661 876 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC003982.1-202ENST00000469928 248 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 CCDC34P1-201ENST00000507441 517 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC112206.3-201ENST00000514578 389 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 RANP3-201ENST00000530970 276 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL355836.1-201ENST00000555951 870 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 C8orf59P2-201ENST00000603441 271 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AC004832.5-201ENST00000608677 401 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL365204.3-201ENST00000612448 685 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 AL138880.2-201ENST00000616214 239 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 uc_338.34-201ENST00000617467 174 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 CUL1P1-201ENST00000509510 2425 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 MTND4P14-201ENST00000435799 1354 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 MTND4P29-201ENST00000503122 1372 ntBASIC3.38□□□□□ -1.87
TTC39AQ5SRH9 TPTE2P4-201ENST00000258589 1605 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 GABRG2-229ENST00000641017 3628 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 RNU6-845P-201ENST00000362578 103 ntBASIC3.37□□□□□ -1.87
TTC39AQ5SRH9 Y_RNA.356-201ENST00000365475 113 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms