Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 CDC27P3-201ENST00000635418 1910 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 RNU4-35P-201ENST00000362588 141 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 SNORA72.1-201ENST00000363485 129 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 SNORA32.2-201ENST00000384049 122 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 RNU6-72P-201ENST00000384285 79 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 RNU1-101P-201ENST00000391171 127 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 SNORA48.7-201ENST00000391302 135 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC233279.1-201ENST00000455300 423 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 snoU109.2-201ENST00000459316 135 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC022634.1-201ENST00000520765 532 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 NUTF2P8-201ENST00000604593 363 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 APOOP1-201ENST00000604695 592 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC006133.1-201ENST00000617106 264 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 AC009093.8-201ENST00000641769 292 ntBASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RUNDC3AQ59EK9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RUNDC3AQ59EK9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 RNU6-1252P-201ENST00000363054 104 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 Y_RNA.414-201ENST00000384011 101 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 SNORA5A-201ENST00000384111 134 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 RNU6-831P-201ENST00000384548 107 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 MIR34A-201ENST00000385130 110 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 MIR670-201ENST00000390142 98 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 RNU2-49P-201ENST00000410666 184 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 RPL7P10-201ENST00000417407 739 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 NDUFA5P4-201ENST00000436704 385 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 BTF3P15-201ENST00000455606 336 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 PMCHL2-203ENST00000457791 237 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC106707.2-201ENST00000484182 374 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC093663.1-201ENST00000497190 394 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC006199.1-201ENST00000548728 219 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 MIR3158-1-201ENST00000583596 81 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC011712.1-201ENST00000588959 234 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC087045.1-201ENST00000605856 382 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AL591516.1-201ENST00000611326 274 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC004852.3-201ENST00000614131 326 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC010378.1-201ENST00000619270 362 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 Z69720.2-201ENST00000624755 279 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC012442.3-202ENST00000636742 206 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
RUNDC3AQ59EK9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC138393.1-203ENST00000327086 343 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 RNU6-254P-201ENST00000363377 107 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 MIR887-201ENST00000401258 79 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 SYF2P2-201ENST00000417620 583 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 MTCO3P46-201ENST00000425787 232 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AL671855.1-201ENST00000446875 1203 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AL133547.1-201ENST00000448546 220 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 MTND3P10-201ENST00000450967 341 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 RNU4-49P-201ENST00000516080 140 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 SNORA67.7-201ENST00000516664 135 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 AC005730.3-201ENST00000583067 366 ntBASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.07□□□□□ -1.92
RUNDC3AQ59EK9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms