Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 RNU7-63P-201ENST00000459054 62 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 AC112771.1-201ENST00000463581 102 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 S100A11P2-201ENST00000467589 312 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 AC117440.1-201ENST00000474107 571 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.11□□□□□ -1.91
ALFQ53S48 AC108078.1-201ENST00000508073 725 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 SNORA25.11-201ENST00000515935 105 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 RNU6-405P-201ENST00000516637 110 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
ALFQ53S48 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.11□□□□□ -1.91
ALFQ53S48 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.11□□□□□ -1.91
ALFQ53S48 AC135279.1-201ENST00000543493 504 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ALFQ53S48 AC023824.2-201ENST00000566185 400 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 MTND1P15-201ENST00000579262 949 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.11□□□□□ -1.91
ALFQ53S48 BNIP3P30-201ENST00000601184 574 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 AC091805.2-201ENST00000603848 235 ntBASIC3.11□□□□□ -1.91
ALFQ53S48 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
ALFQ53S48 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALFQ53S48 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 RNU6-607P-201ENST00000411283 108 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 BTF3L4P1-201ENST00000413813 468 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.1□□□□□ -1.91
ALFQ53S48 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.1□□□□□ -1.91
ALFQ53S48 RPL7P12-201ENST00000446719 750 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 AC018437.1-201ENST00000492214 406 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 AC092436.1-201ENST00000506450 503 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 LRRC34P2-201ENST00000514850 553 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 SMURF2P1-201ENST00000514992 481 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 RPL7P20-201ENST00000520308 745 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.1□□□□□ -1.91
ALFQ53S48 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.1□□□□□ -1.91
ALFQ53S48 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.1□□□□□ -1.91
ALFQ53S48 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.1□□□□□ -1.91
ALFQ53S48 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.1□□□□□ -1.91
ALFQ53S48 AC097065.2-201ENST00000608159 533 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
ALFQ53S48 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 MTND4P14-201ENST00000435799 1354 ntBASIC3.1□□□□□ -1.91
ALFQ53S48 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.1□□□□□ -1.91
ALFQ53S48 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.09□□□□□ -1.91
ALFQ53S48 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.91
ALFQ53S48 Y_RNA.1-201ENST00000352915 104 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 RNU6-942P-201ENST00000363002 107 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
ALFQ53S48 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 AC138623.1-201ENST00000418060 216 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.09□□□□□ -1.91
ALFQ53S48 RPL35AP12-201ENST00000425362 338 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC093151.1-201ENST00000427711 313 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 AL118520.1-201ENST00000450770 291 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 RPS3AP14-201ENST00000483907 780 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 AIG1P1-201ENST00000503376 148 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 AC091133.4-201ENST00000511142 308 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AP002404.1-201ENST00000532005 451 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC079598.5-201ENST00000547460 117 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.09□□□□□ -1.91
ALFQ53S48 MIR5571-201ENST00000577998 113 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.09□□□□□ -1.91
ALFQ53S48 LRRC37A5P-203ENST00000580181 585 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 RPS15AP11-201ENST00000594193 385 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC012119.1-201ENST00000603184 222 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AL391646.1-201ENST00000603860 190 ntBASIC3.09□□□□□ -1.91
ALFQ53S48 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.09□□□□□ -1.91
ALFQ53S48 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
ALFQ53S48 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ALFQ53S48 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ALFQ53S48 RBBP8P1-201ENST00000449447 1844 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALFQ53S48 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ALFQ53S48 SNORA38-201ENST00000363946 132 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 RNU6-843P-201ENST00000384454 104 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 SNORD116-20-201ENST00000384529 92 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 RPS4XP8-201ENST00000402039 771 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.08□□□□□ -1.92
ALFQ53S48 RNU4-55P-201ENST00000410731 137 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 RNA5SP344-201ENST00000411081 104 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.08□□□□□ -1.92
ALFQ53S48 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.08□□□□□ -1.92
ALFQ53S48 MTCO2P19-201ENST00000427513 598 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
ALFQ53S48 SNRPFP3-201ENST00000457792 225 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 RPS29P2-201ENST00000479278 136 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 AC103975.1-201ENST00000482506 483 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 AC105313.1-201ENST00000509121 353 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 CR383656.8-201ENST00000549046 145 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 AC024909.2-201ENST00000553035 286 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 AC009063.1-201ENST00000563342 702 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 MTCYBP33-201ENST00000575007 1130 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 NDUFA8P1-201ENST00000605525 367 ntBASIC3.08□□□□□ -1.92
ALFQ53S48 HAUS6P2-201ENST00000433254 2404 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms