Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 RNU6-179P-201ENST00000363350 107 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 RNU6-61P-201ENST00000365528 109 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AL133475.1-201ENST00000404414 305 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 U6atac.2-201ENST00000408644 118 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 RNA5SP184-201ENST00000411071 108 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 Y_RNA.623-201ENST00000411128 95 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 RNA5SP111-201ENST00000411386 101 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40BQ12829 AC016831.2-201ENST00000417179 352 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AL365338.1-201ENST00000422282 858 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AC063976.3-201ENST00000426849 329 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AL022238.1-201ENST00000442557 355 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.1□□□□□ -2.07
RAB40BQ12829 RPL37P25-201ENST00000507308 276 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 RBBP4P6-201ENST00000508098 202 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC119751.5-201ENST00000514077 770 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 SMURF2P1-201ENST00000514992 481 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 RNA5SP320-201ENST00000516263 124 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 OR4R1P-201ENST00000529879 463 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AC087883.1-201ENST00000551882 391 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC092325.1-201ENST00000566449 554 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC025678.1-201ENST00000567861 338 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AC012213.3-201ENST00000577199 777 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.1□□□□□ -2.07
RAB40BQ12829 AL670379.10-201ENST00000604330 253 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AL670379.9-201ENST00000605428 253 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC087045.1-201ENST00000605856 382 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 AC025034.2-201ENST00000623264 286 ntBASIC2.1□□□□□ -2.07
RAB40BQ12829 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RAB40BQ12829 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40BQ12829 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RAB40BQ12829 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.1□□□□□ -2.07
RAB40BQ12829 FARSBP1-201ENST00000435808 1778 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 RNU6-858P-201ENST00000362436 107 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 Y_RNA.111-201ENST00000363248 100 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40BQ12829 FTH1P15-201ENST00000406984 280 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 CYCSP48-201ENST00000417124 323 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40BQ12829 AC097463.2-201ENST00000421074 142 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC009961.2-201ENST00000435771 251 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40BQ12829 GAPDHP17-201ENST00000449858 1001 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40BQ12829 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RAB40BQ12829 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40BQ12829 SNORD109B-201ENST00000458961 67 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 SNORD109A-201ENST00000459128 67 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 DYNLL1P5-201ENST00000467158 270 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC116562.3-201ENST00000506136 177 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 RNA5SP356-201ENST00000515972 94 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 MIR892C-201ENST00000516410 77 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.09□□□□□ -2.07
RAB40BQ12829 MTCYBP20-201ENST00000524239 1129 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC068587.5-201ENST00000528506 175 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AP002453.2-201ENST00000533503 320 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40BQ12829 CLIC4P2-201ENST00000601934 717 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 U6.42-201ENST00000618440 107 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.09□□□□□ -2.07
RAB40BQ12829 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.09□□□□□ -2.07
RAB40BQ12829 AC092656.1-203ENST00000624134 423 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 AC138627.2-201ENST00000624202 601 ntBASIC2.09□□□□□ -2.07
RAB40BQ12829 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
RAB40BQ12829 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RAB40BQ12829 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40BQ12829 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40BQ12829 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40BQ12829 SNORA67.1-201ENST00000364749 141 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 RNA5SP125-201ENST00000364843 120 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 RNU6-1179P-201ENST00000384667 107 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 MIR144-201ENST00000384886 86 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AL591416.1-201ENST00000404015 867 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 CIR1P3-201ENST00000405137 479 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 AL627311.1-201ENST00000431514 115 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 MTATP6P16-201ENST00000434543 526 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40BQ12829 RPL7P12-201ENST00000446719 750 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AL031659.1-201ENST00000447075 539 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 RNA5SP269-201ENST00000459032 137 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 SNORD42A-201ENST00000459584 64 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 MRPL42P6-201ENST00000486397 371 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC098862.1-201ENST00000504991 413 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 AC026436.1-201ENST00000510537 270 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms