Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH1Q08174 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH1Q08174 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH1Q08174 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
PCDH1Q08174 AC118273.1-201ENST00000525324 3006 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH1Q08174 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH1Q08174 AC006971.1-201ENST00000407916 4486 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH1Q08174 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH1Q08174 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH1Q08174 RNVU1-6-201ENST00000364688 164 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 RNA5SP22-201ENST00000365393 109 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 Z98749.2-208ENST00000381646 500 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 SNORA56-201ENST00000383966 129 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 Y_RNA.504-201ENST00000384481 104 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 RNU6-140P-201ENST00000384566 108 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 MIR153-2-201ENST00000385225 87 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 RNU1-139P-201ENST00000391307 165 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH1Q08174 RPS4XP3-201ENST00000398541 413 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 UBA52P6-201ENST00000399822 382 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 RNA5SP44-201ENST00000410446 133 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 AL160275.2-201ENST00000412010 394 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 AC092047.1-201ENST00000424997 240 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.35□□□□□ -1.71
PCDH1Q08174 AC012671.1-201ENST00000451912 203 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 RNU6-1114P-201ENST00000516022 107 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 Y_RNA.703-201ENST00000516846 111 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 RNU6-1073P-201ENST00000517182 106 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
PCDH1Q08174 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDH1Q08174 LINC00933-203ENST00000559812 219 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 AC010620.2-201ENST00000600135 313 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 SNORD113-5-201ENST00000607261 78 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH1Q08174 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDH1Q08174 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.35□□□□□ -1.71
PCDH1Q08174 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PCDH1Q08174 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH1Q08174 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH1Q08174 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH1Q08174 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PCDH1Q08174 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCDH1Q08174 RNU1-63P-201ENST00000383902 164 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 MIR325-201ENST00000385260 98 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCDH1Q08174 MTCO2P33-201ENST00000402100 465 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 RN7SKP167-201ENST00000411047 285 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDH1Q08174 AC069285.2-201ENST00000440210 275 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 AC243964.1-201ENST00000441814 261 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 HMGN2P21-201ENST00000447764 270 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 AP000870.1-201ENST00000472927 406 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 AF186996.7-201ENST00000492781 209 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH1Q08174 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH1Q08174 MTND6P33-201ENST00000571794 183 ntBASIC4.34□□□□□ -1.71
PCDH1Q08174 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDH1Q08174 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDH1Q08174 HAUS6P2-201ENST00000433254 2404 ntBASIC4.34□□□□□ -1.72
PCDH1Q08174 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDH1Q08174 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.72
PCDH1Q08174 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDH1Q08174 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDH1Q08174 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDH1Q08174 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AC027290.2-201ENST00000623210 18662 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 ZNF826P-207ENST00000622273 1910 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AL353743.1-202ENST00000431724 1695 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH1Q08174 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AC079741.1-201ENST00000321498 212 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 RNU6-326P-201ENST00000365480 107 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 RNU1-44P-201ENST00000384453 163 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 MIR518D-201ENST00000385014 87 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 RNA5SP213-201ENST00000391031 106 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 RNU6-1245P-201ENST00000411130 106 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AL031659.1-201ENST00000447075 539 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH1Q08174 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AC087477.1-201ENST00000465747 340 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH1Q08174 RNU2-31P-201ENST00000516954 155 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AC087441.2-201ENST00000529141 262 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AC069240.1-201ENST00000548774 375 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.33□□□□□ -1.72
PCDH1Q08174 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH1Q08174 ZNF192P1-203ENST00000565888 810 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 Z83818.1-201ENST00000603584 150 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AC037487.3-201ENST00000606668 112 ntBASIC4.33□□□□□ -1.72
PCDH1Q08174 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDH1Q08174 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms