Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-370P-201ENST00000411008 104 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AL096701.2-201ENST00000416920 238 ntBASIC3.2□□□□□ -1.9
RAE1P78406 MTCO2P27-201ENST00000420740 428 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AL645568.3-201ENST00000433683 316 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AL590664.1-201ENST00000448065 339 ntBASIC3.2□□□□□ -1.9
RAE1P78406 RPL37P4-201ENST00000448908 268 ntBASIC3.2□□□□□ -1.9
RAE1P78406 HMGB3P8-201ENST00000449709 577 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AC006445.2-201ENST00000510061 472 ntBASIC3.2□□□□□ -1.9
RAE1P78406 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.2□□□□□ -1.9
RAE1P78406 AC092436.3-201ENST00000511788 257 ntBASIC3.2□□□□□ -1.9
RAE1P78406 RNU6-1016P-201ENST00000516689 94 ntBASIC3.2□□□□□ -1.9
RAE1P78406 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.2□□□□□ -1.9
RAE1P78406 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAE1P78406 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.2□□□□□ -1.9
RAE1P78406 HIGD1AP1-201ENST00000550979 275 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.2□□□□□ -1.9
RAE1P78406 MIR4782-201ENST00000577987 79 ntBASIC3.2□□□□□ -1.9
RAE1P78406 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.2□□□□□ -1.9
RAE1P78406 MIR3609-201ENST00000582661 80 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.2□□□□□ -1.9
RAE1P78406 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
RAE1P78406 AC006557.5-201ENST00000603126 811 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AP000787.2-201ENST00000604432 568 ntBASIC3.2□□□□□ -1.9
RAE1P78406 AC110741.2-201ENST00000605278 268 ntBASIC3.2□□□□□ -1.9
RAE1P78406 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAE1P78406 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAE1P78406 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.2□□□□□ -1.9
RAE1P78406 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
RAE1P78406 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.19□□□□□ -1.9
RAE1P78406 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAE1P78406 AC007496.3-201ENST00000624987 3443 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
RAE1P78406 Y_RNA.259-201ENST00000364619 101 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNU1-73P-201ENST00000383971 164 ntBASIC3.19□□□□□ -1.9
RAE1P78406 SNORD116-29-201ENST00000384516 83 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNU6-601P-201ENST00000384540 107 ntBASIC3.19□□□□□ -1.9
RAE1P78406 SNORD73A-201ENST00000386062 65 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNY4P36-201ENST00000391116 96 ntBASIC3.19□□□□□ -1.9
RAE1P78406 MTCYBP4-201ENST00000401524 249 ntBASIC3.19□□□□□ -1.9
RAE1P78406 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
RAE1P78406 RNU6-293P-201ENST00000411259 106 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AC093578.1-201ENST00000415219 368 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AF228730.4-201ENST00000421457 183 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AL353729.1-201ENST00000425044 720 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AC091286.1-201ENST00000431233 461 ntBASIC3.19□□□□□ -1.9
RAE1P78406 SNRPEP4-201ENST00000435815 279 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
RAE1P78406 SETP5-201ENST00000437270 562 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AC007677.1-201ENST00000445757 515 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AC006539.3-201ENST00000454258 129 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.19□□□□□ -1.9
RAE1P78406 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.19□□□□□ -1.9
RAE1P78406 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RAE1P78406 AC116337.1-201ENST00000509680 687 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNU1-103P-201ENST00000516502 125 ntBASIC3.19□□□□□ -1.9
RAE1P78406 Y_RNA.701-201ENST00000516812 110 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RNU6-1183P-201ENST00000517054 60 ntBASIC3.19□□□□□ -1.9
RAE1P78406 AC098657.3-201ENST00000620434 263 ntBASIC3.19□□□□□ -1.9
RAE1P78406 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.19□□□□□ -1.9
RAE1P78406 U6.99-201ENST00000637524 83 ntBASIC3.19□□□□□ -1.9
RAE1P78406 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAE1P78406 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAE1P78406 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
RAE1P78406 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAE1P78406 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.18□□□□□ -1.9
RAE1P78406 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.18□□□□□ -1.9
RAE1P78406 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
RAE1P78406 XGY1-201ENST00000381172 446 ntBASIC3.18□□□□□ -1.9
RAE1P78406 Y_RNA.419-201ENST00000384041 102 ntBASIC3.18□□□□□ -1.9
RAE1P78406 MIR554-201ENST00000384874 96 ntBASIC3.18□□□□□ -1.9
RAE1P78406 MIR134-201ENST00000385258 73 ntBASIC3.18□□□□□ -1.9
RAE1P78406 RNU6-328P-201ENST00000390887 106 ntBASIC3.18□□□□□ -1.9
RAE1P78406 PTMAP5-201ENST00000393073 333 ntBASIC3.18□□□□□ -1.9
RAE1P78406 NDUFS5P4-201ENST00000412983 318 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC245054.2-201ENST00000415639 319 ntBASIC3.18□□□□□ -1.9
RAE1P78406 PGBD4P6-201ENST00000421501 610 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AL159987.2-201ENST00000432754 307 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.18□□□□□ -1.9
RAE1P78406 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.18□□□□□ -1.9
RAE1P78406 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
RAE1P78406 RN7SL442P-201ENST00000473804 320 ntBASIC3.18□□□□□ -1.9
RAE1P78406 RPS4XP22-201ENST00000480755 780 ntBASIC3.18□□□□□ -1.9
RAE1P78406 RPL30P14-201ENST00000482744 348 ntBASIC3.18□□□□□ -1.9
RAE1P78406 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.18□□□□□ -1.9
RAE1P78406 FCF1P8-201ENST00000510322 597 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.18□□□□□ -1.9
RAE1P78406 Y_RNA.718-201ENST00000517110 102 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC023632.4-201ENST00000517783 191 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC104027.1-201ENST00000521887 300 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC104576.1-201ENST00000524225 88 ntBASIC3.18□□□□□ -1.9
RAE1P78406 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAE1P78406 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.18□□□□□ -1.9
RAE1P78406 APOOP3-201ENST00000536787 586 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
RAE1P78406 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms