Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
RPS28P62857 RNU6-7-201ENST00000364784 107 ntBASIC0.63□□□□□ -2.31
RPS28P62857 RNU6-8-201ENST00000365467 107 ntBASIC0.63□□□□□ -2.31
RPS28P62857 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
RPS28P62857 MIR7-3-201ENST00000384898 110 ntBASIC0.63□□□□□ -2.31
RPS28P62857 MIR183-201ENST00000384958 110 ntBASIC0.63□□□□□ -2.31
RPS28P62857 MIR100-201ENST00000385259 80 ntBASIC0.63□□□□□ -2.31
RPS28P62857 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
RPS28P62857 AC000041.1-201ENST00000439655 175 ntBASIC0.63□□□□□ -2.31
RPS28P62857 MED28P2-201ENST00000475771 317 ntBASIC0.63□□□□□ -2.31
RPS28P62857 RPL30P6-201ENST00000475925 342 ntBASIC0.63□□□□□ -2.31
RPS28P62857 HMGN2P9-201ENST00000476875 229 ntBASIC0.63□□□□□ -2.31
RPS28P62857 RN7SL432P-201ENST00000484057 298 ntBASIC0.63□□□□□ -2.31
RPS28P62857 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.63□□□□□ -2.31
RPS28P62857 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC0.63□□□□□ -2.31
RPS28P62857 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC0.63□□□□□ -2.31
RPS28P62857 AC023538.1-201ENST00000534576 736 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AC006518.2-201ENST00000542513 940 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AC023813.2-201ENST00000564321 469 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.63□□□□□ -2.31
RPS28P62857 AC015720.1-201ENST00000565251 277 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AC090330.1-201ENST00000588646 764 ntBASIC0.63□□□□□ -2.31
RPS28P62857 BNIP3P30-201ENST00000601184 574 ntBASIC0.63□□□□□ -2.31
RPS28P62857 MZT1P2-201ENST00000604387 248 ntBASIC0.63□□□□□ -2.31
RPS28P62857 MIR502-201ENST00000606349 86 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AC120349.3-201ENST00000624377 529 ntBASIC0.63□□□□□ -2.31
RPS28P62857 OR4G3P-201ENST00000633500 913 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AL137790.1-201ENST00000634283 177 ntBASIC0.63□□□□□ -2.31
RPS28P62857 AC107982.1-201ENST00000507171 1300 ntBASIC0.63□□□□□ -2.31
RPS28P62857 RNU6-1210P-201ENST00000363775 107 ntBASIC0.62□□□□□ -2.31
RPS28P62857 RNU6-296P-201ENST00000384608 107 ntBASIC0.62□□□□□ -2.31
RPS28P62857 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.62□□□□□ -2.31
RPS28P62857 AC009518.2-201ENST00000418056 731 ntBASIC0.62□□□□□ -2.31
RPS28P62857 RPL36AP36-201ENST00000418616 301 ntBASIC0.62□□□□□ -2.31
RPS28P62857 SNX2P2-201ENST00000424553 323 ntBASIC0.62□□□□□ -2.31
RPS28P62857 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.62□□□□□ -2.31
RPS28P62857 MTND4P6-201ENST00000438297 472 ntBASIC0.62□□□□□ -2.31
RPS28P62857 HSPE1P9-201ENST00000440046 311 ntBASIC0.62□□□□□ -2.31
RPS28P62857 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.62□□□□□ -2.31
RPS28P62857 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.62□□□□□ -2.31
RPS28P62857 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.62□□□□□ -2.31
RPS28P62857 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.62□□□□□ -2.31
RPS28P62857 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC0.62□□□□□ -2.31
RPS28P62857 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.62□□□□□ -2.31
RPS28P62857 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.62□□□□□ -2.31
RPS28P62857 AL512310.8-201ENST00000550183 120 ntBASIC0.62□□□□□ -2.31
RPS28P62857 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.62□□□□□ -2.31
RPS28P62857 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.62□□□□□ -2.31
RPS28P62857 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC0.62□□□□□ -2.31
RPS28P62857 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.62□□□□□ -2.31
RPS28P62857 AC091834.1-201ENST00000614543 472 ntBASIC0.62□□□□□ -2.31
RPS28P62857 AL589994.2-201ENST00000621124 579 ntBASIC0.62□□□□□ -2.31
RPS28P62857 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.62□□□□□ -2.31
RPS28P62857 ZNF72P-201ENST00000425869 1908 ntBASIC0.62□□□□□ -2.31
RPS28P62857 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RPS28P62857 MIR515-2-201ENST00000384883 83 ntBASIC0.61□□□□□ -2.31
RPS28P62857 MIR515-1-201ENST00000384884 83 ntBASIC0.61□□□□□ -2.31
RPS28P62857 RNU2-7P-201ENST00000410794 178 ntBASIC0.61□□□□□ -2.31
RPS28P62857 RN7SKP192-201ENST00000411291 327 ntBASIC0.61□□□□□ -2.31
RPS28P62857 UBE2V1P10-201ENST00000414685 269 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC004975.1-201ENST00000428733 208 ntBASIC0.61□□□□□ -2.31
RPS28P62857 RSL24D1P3-201ENST00000449255 495 ntBASIC0.61□□□□□ -2.31
RPS28P62857 MRPL42P4-201ENST00000453267 443 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.61□□□□□ -2.31
RPS28P62857 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC0.61□□□□□ -2.31
RPS28P62857 RPL31P3-201ENST00000458430 332 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AL358832.1-201ENST00000497800 389 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.61□□□□□ -2.31
RPS28P62857 MTND4P2-201ENST00000507767 1203 ntBASIC0.61□□□□□ -2.31
RPS28P62857 RNU6-143P-201ENST00000516942 93 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.61□□□□□ -2.31
RPS28P62857 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC0.61□□□□□ -2.31
RPS28P62857 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.61□□□□□ -2.31
RPS28P62857 AL512310.1-201ENST00000548639 172 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.61□□□□□ -2.31
RPS28P62857 AC009063.1-201ENST00000563342 702 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC008088.1-201ENST00000580993 280 ntBASIC0.61□□□□□ -2.31
RPS28P62857 MIR4325-201ENST00000583049 90 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AP001981.2-201ENST00000603241 418 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC005332.6-201ENST00000613178 446 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC010975.3-201ENST00000618727 978 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC253576.2-201ENST00000618815 580 ntBASIC0.61□□□□□ -2.31
RPS28P62857 MIR3529-201ENST00000637713 78 ntBASIC0.61□□□□□ -2.31
RPS28P62857 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.61□□□□□ -2.31
RPS28P62857 AC006026.1-201ENST00000444025 1803 ntBASIC0.61□□□□□ -2.31
RPS28P62857 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RPS28P62857 MIR9-3-201ENST00000385084 90 ntBASIC0.6□□□□□ -2.31
RPS28P62857 RNU6-360P-201ENST00000390944 104 ntBASIC0.6□□□□□ -2.31
RPS28P62857 RNU4-27P-201ENST00000410889 139 ntBASIC0.6□□□□□ -2.31
RPS28P62857 RNA5SP184-201ENST00000411071 108 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AL135786.1-201ENST00000415892 214 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AL158050.1-201ENST00000416077 457 ntBASIC0.6□□□□□ -2.31
RPS28P62857 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.6□□□□□ -2.31
RPS28P62857 RPS15AP12-201ENST00000419498 388 ntBASIC0.6□□□□□ -2.31
RPS28P62857 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.6□□□□□ -2.31
RPS28P62857 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RPS28P62857 AL354695.1-201ENST00000427935 228 ntBASIC0.6□□□□□ -2.31
RPS28P62857 MTCYBP15-201ENST00000433123 1127 ntBASIC0.6□□□□□ -2.31
RPS28P62857 SEPT7P5-201ENST00000434048 306 ntBASIC0.6□□□□□ -2.31
RPS28P62857 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms