Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
VCPP55072 RPS3AP3-201ENST00000411933 242 ntBASIC2.52□□□□□ -2.01
VCPP55072 HMGN1P14-201ENST00000412459 517 ntBASIC2.52□□□□□ -2.01
VCPP55072 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.52□□□□□ -2.01
VCPP55072 AC137499.1-201ENST00000427602 88 ntBASIC2.52□□□□□ -2.01
VCPP55072 AL592045.1-201ENST00000429867 352 ntBASIC2.52□□□□□ -2.01
VCPP55072 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.52□□□□□ -2.01
VCPP55072 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.52□□□□□ -2.01
VCPP55072 SNRPEP9-201ENST00000436794 238 ntBASIC2.52□□□□□ -2.01
VCPP55072 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.52□□□□□ -2.01
VCPP55072 CECR9-201ENST00000453421 199 ntBASIC2.52□□□□□ -2.01
VCPP55072 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.52□□□□□ -2.01
VCPP55072 RPL23AP42-201ENST00000471152 471 ntBASIC2.52□□□□□ -2.01
VCPP55072 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.52□□□□□ -2.01
VCPP55072 RNU5F-8P-201ENST00000515941 111 ntBASIC2.52□□□□□ -2.01
VCPP55072 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
VCPP55072 RNU6-1092P-201ENST00000516955 87 ntBASIC2.52□□□□□ -2.01
VCPP55072 RNU2-46P-201ENST00000517038 113 ntBASIC2.52□□□□□ -2.01
VCPP55072 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.52□□□□□ -2.01
VCPP55072 AL358072.1-201ENST00000604156 575 ntBASIC2.52□□□□□ -2.01
VCPP55072 AC004805.2-201ENST00000605382 482 ntBASIC2.52□□□□□ -2.01
VCPP55072 AC073114.1-201ENST00000612027 490 ntBASIC2.52□□□□□ -2.01
VCPP55072 MIR6895-201ENST00000613497 78 ntBASIC2.52□□□□□ -2.01
VCPP55072 AL589994.2-201ENST00000621124 579 ntBASIC2.52□□□□□ -2.01
VCPP55072 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.52□□□□□ -2.01
VCPP55072 CU459211.1-201ENST00000635667 749 ntBASIC2.52□□□□□ -2.01
VCPP55072 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
VCPP55072 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.51□□□□□ -2.01
VCPP55072 FGF7P2-201ENST00000332473 296 ntBASIC2.51□□□□□ -2.01
VCPP55072 MIR21-201ENST00000362134 72 ntBASIC2.51□□□□□ -2.01
VCPP55072 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
VCPP55072 Y_RNA.355-201ENST00000365462 98 ntBASIC2.51□□□□□ -2.01
VCPP55072 SMIM11P1-201ENST00000369586 178 ntBASIC2.51□□□□□ -2.01
VCPP55072 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VCPP55072 RNU6-750P-201ENST00000390946 107 ntBASIC2.51□□□□□ -2.01
VCPP55072 SNORA40.3-201ENST00000390964 122 ntBASIC2.51□□□□□ -2.01
VCPP55072 RPL23AP32-201ENST00000395315 459 ntBASIC2.51□□□□□ -2.01
VCPP55072 RNU2-8P-201ENST00000410727 190 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC007283.2-201ENST00000424739 197 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC093106.2-201ENST00000428212 385 ntBASIC2.51□□□□□ -2.01
VCPP55072 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.51□□□□□ -2.01
VCPP55072 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.51□□□□□ -2.01
VCPP55072 GPM6BP2-201ENST00000432046 144 ntBASIC2.51□□□□□ -2.01
VCPP55072 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.51□□□□□ -2.01
VCPP55072 USP9YP15-201ENST00000442391 422 ntBASIC2.51□□□□□ -2.01
VCPP55072 GPM6BP1-201ENST00000446387 144 ntBASIC2.51□□□□□ -2.01
VCPP55072 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCPP55072 AL033528.1-201ENST00000453780 140 ntBASIC2.51□□□□□ -2.01
VCPP55072 AL139109.1-201ENST00000455491 297 ntBASIC2.51□□□□□ -2.01
VCPP55072 Y_RNA.688-201ENST00000516565 95 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.51□□□□□ -2.01
VCPP55072 AC021269.2-201ENST00000532318 330 ntBASIC2.51□□□□□ -2.01
VCPP55072 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.51□□□□□ -2.01
VCPP55072 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.51□□□□□ -2.01
VCPP55072 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.51□□□□□ -2.01
VCPP55072 CLIC4P2-201ENST00000601934 717 ntBASIC2.51□□□□□ -2.01
VCPP55072 AL451064.1-201ENST00000607718 471 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC067747.1-201ENST00000608026 250 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC025594.3-201ENST00000613068 790 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC008250.2-201ENST00000615261 205 ntBASIC2.51□□□□□ -2.01
VCPP55072 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.51□□□□□ -2.01
VCPP55072 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCPP55072 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VCPP55072 MTND4P27-201ENST00000450813 1354 ntBASIC2.5□□□□□ -2.01
VCPP55072 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VCPP55072 HSPE1P11-201ENST00000339579 310 ntBASIC2.5□□□□□ -2.01
VCPP55072 SNORD56.2-201ENST00000363242 71 ntBASIC2.5□□□□□ -2.01
VCPP55072 U8.3-201ENST00000363321 132 ntBASIC2.5□□□□□ -2.01
VCPP55072 RNU6-960P-201ENST00000364056 120 ntBASIC2.5□□□□□ -2.01
VCPP55072 GSTA9P-201ENST00000406231 611 ntBASIC2.5□□□□□ -2.01
VCPP55072 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.5□□□□□ -2.01
VCPP55072 ISCA1P1-201ENST00000426679 387 ntBASIC2.5□□□□□ -2.01
VCPP55072 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.5□□□□□ -2.01
VCPP55072 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.5□□□□□ -2.01
VCPP55072 MTND4P25-201ENST00000441039 533 ntBASIC2.5□□□□□ -2.01
VCPP55072 FABP5P15-201ENST00000453566 214 ntBASIC2.5□□□□□ -2.01
VCPP55072 snoU109.1-201ENST00000459339 135 ntBASIC2.5□□□□□ -2.01
VCPP55072 RAP1BP2-201ENST00000478270 544 ntBASIC2.5□□□□□ -2.01
VCPP55072 RPL36AP21-201ENST00000490372 323 ntBASIC2.5□□□□□ -2.01
VCPP55072 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.5□□□□□ -2.01
VCPP55072 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
VCPP55072 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.5□□□□□ -2.01
VCPP55072 RNU7-51P-201ENST00000516560 62 ntBASIC2.5□□□□□ -2.01
VCPP55072 RNA5SP165-201ENST00000517142 115 ntBASIC2.5□□□□□ -2.01
VCPP55072 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.5□□□□□ -2.01
VCPP55072 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.5□□□□□ -2.01
VCPP55072 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.5□□□□□ -2.01
VCPP55072 AC005771.1-201ENST00000585581 349 ntBASIC2.5□□□□□ -2.01
VCPP55072 AC245884.12-201ENST00000615364 59 ntBASIC2.5□□□□□ -2.01
VCPP55072 MIR6873-201ENST00000622788 63 ntBASIC2.5□□□□□ -2.01
VCPP55072 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.5□□□□□ -2.01
VCPP55072 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VCPP55072 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VCPP55072 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VCPP55072 RNU6-288P-201ENST00000363690 104 ntBASIC2.49□□□□□ -2.01
VCPP55072 RNU6-188P-201ENST00000364207 107 ntBASIC2.49□□□□□ -2.01
VCPP55072 SNORA80E-201ENST00000384744 137 ntBASIC2.49□□□□□ -2.01
VCPP55072 RNU6-817P-201ENST00000391083 104 ntBASIC2.49□□□□□ -2.01
VCPP55072 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.49□□□□□ -2.01
VCPP55072 ELOCP4-201ENST00000420090 333 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms