Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COPAP53621 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COPAP53621 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COPAP53621 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.49□□□□□ -1.85
COPAP53621 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
COPAP53621 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COPAP53621 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.48□□□□□ -1.85
COPAP53621 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
COPAP53621 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COPAP53621 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COPAP53621 U3.12-201ENST00000364498 214 ntBASIC3.48□□□□□ -1.85
COPAP53621 SNORD81.2-201ENST00000365153 76 ntBASIC3.48□□□□□ -1.85
COPAP53621 Y_RNA.356-201ENST00000365475 113 ntBASIC3.48□□□□□ -1.85
COPAP53621 PDCL2P1-201ENST00000419302 352 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.48□□□□□ -1.85
COPAP53621 AC007560.1-201ENST00000426912 237 ntBASIC3.48□□□□□ -1.85
COPAP53621 MTND4LP16-201ENST00000440828 295 ntBASIC3.48□□□□□ -1.85
COPAP53621 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.48□□□□□ -1.85
COPAP53621 DYNLL1P5-201ENST00000467158 270 ntBASIC3.48□□□□□ -1.85
COPAP53621 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.48□□□□□ -1.85
COPAP53621 RPL21P13-201ENST00000488305 481 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC008716.1-201ENST00000511084 513 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC112206.3-201ENST00000514578 389 ntBASIC3.48□□□□□ -1.85
COPAP53621 RN7SKP282-201ENST00000516824 299 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.48□□□□□ -1.85
COPAP53621 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.48□□□□□ -1.85
COPAP53621 MIR3941-201ENST00000582572 103 ntBASIC3.48□□□□□ -1.85
COPAP53621 BNIP3P25-201ENST00000596023 559 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC073539.2-201ENST00000597113 165 ntBASIC3.48□□□□□ -1.85
COPAP53621 ATP1B3P1-201ENST00000605365 821 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC103705.1-201ENST00000619013 241 ntBASIC3.48□□□□□ -1.85
COPAP53621 AC005858.4-201ENST00000623191 700 ntBASIC3.48□□□□□ -1.85
COPAP53621 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
COPAP53621 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COPAP53621 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COPAP53621 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COPAP53621 SNORD113-7-201ENST00000363762 77 ntBASIC3.47□□□□□ -1.85
COPAP53621 RNU6-884P-201ENST00000363889 107 ntBASIC3.47□□□□□ -1.85
COPAP53621 RNU6-270P-201ENST00000364131 105 ntBASIC3.47□□□□□ -1.85
COPAP53621 RNU6-805P-201ENST00000365643 106 ntBASIC3.47□□□□□ -1.85
COPAP53621 Y_RNA.414-201ENST00000384011 101 ntBASIC3.47□□□□□ -1.85
COPAP53621 RNU6-1013P-201ENST00000384180 107 ntBASIC3.47□□□□□ -1.85
COPAP53621 RNU6-831P-201ENST00000384548 107 ntBASIC3.47□□□□□ -1.85
COPAP53621 Z92545.1-201ENST00000411782 234 ntBASIC3.47□□□□□ -1.85
COPAP53621 NDUFB4P5-201ENST00000415445 361 ntBASIC3.47□□□□□ -1.85
COPAP53621 RPL7P10-201ENST00000417407 739 ntBASIC3.47□□□□□ -1.85
COPAP53621 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.47□□□□□ -1.85
COPAP53621 AL353678.1-201ENST00000422735 741 ntBASIC3.47□□□□□ -1.85
COPAP53621 HMGN2P30-201ENST00000423237 256 ntBASIC3.47□□□□□ -1.85
COPAP53621 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.47□□□□□ -1.85
COPAP53621 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.47□□□□□ -1.85
COPAP53621 RPS29P12-201ENST00000460178 152 ntBASIC3.47□□□□□ -1.85
COPAP53621 AC021205.2-201ENST00000480069 347 ntBASIC3.47□□□□□ -1.85
COPAP53621 HMGB1P30-201ENST00000492455 606 ntBASIC3.47□□□□□ -1.85
COPAP53621 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 MTND3P25-201ENST00000509243 135 ntBASIC3.47□□□□□ -1.85
COPAP53621 TBCAP3-201ENST00000512475 312 ntBASIC3.47□□□□□ -1.85
COPAP53621 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
COPAP53621 AC009902.1-201ENST00000519351 183 ntBASIC3.47□□□□□ -1.85
COPAP53621 RAB11AP2-201ENST00000545905 639 ntBASIC3.47□□□□□ -1.85
COPAP53621 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.47□□□□□ -1.85
COPAP53621 MIR4742-201ENST00000581069 85 ntBASIC3.47□□□□□ -1.85
COPAP53621 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.47□□□□□ -1.85
COPAP53621 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.47□□□□□ -1.85
COPAP53621 AC243960.4-201ENST00000600532 288 ntBASIC3.47□□□□□ -1.85
COPAP53621 NUTF2P8-201ENST00000604593 363 ntBASIC3.47□□□□□ -1.85
COPAP53621 AL022345.1-201ENST00000607292 135 ntBASIC3.47□□□□□ -1.85
COPAP53621 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
COPAP53621 U6.99-201ENST00000637524 83 ntBASIC3.47□□□□□ -1.85
COPAP53621 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
COPAP53621 MTND4P29-201ENST00000503122 1372 ntBASIC3.47□□□□□ -1.85
COPAP53621 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COPAP53621 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.46□□□□□ -1.85
COPAP53621 AC073544.1-201ENST00000600110 1595 ntBASIC3.46□□□□□ -1.85
COPAP53621 MIR412-201ENST00000362142 91 ntBASIC3.46□□□□□ -1.86
COPAP53621 AL356432.1-201ENST00000405809 419 ntBASIC3.46□□□□□ -1.86
COPAP53621 RPLP0P7-201ENST00000416050 667 ntBASIC3.46□□□□□ -1.86
COPAP53621 NCOR1P3-201ENST00000420479 303 ntBASIC3.46□□□□□ -1.86
COPAP53621 AC099548.1-201ENST00000421443 426 ntBASIC3.46□□□□□ -1.86
COPAP53621 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.46□□□□□ -1.86
COPAP53621 RPL23AP82-202ENST00000427528 469 ntBASIC3.46□□□□□ -1.86
COPAP53621 NDUFA5P4-201ENST00000436704 385 ntBASIC3.46□□□□□ -1.86
COPAP53621 AL357552.1-201ENST00000445254 415 ntBASIC3.46□□□□□ -1.86
COPAP53621 PPP1R2P5-201ENST00000457256 603 ntBASIC3.46□□□□□ -1.86
COPAP53621 snoU13.28-201ENST00000459235 104 ntBASIC3.46□□□□□ -1.86
COPAP53621 RNU6-329P-201ENST00000459618 107 ntBASIC3.46□□□□□ -1.86
COPAP53621 AC079140.5-201ENST00000507882 310 ntBASIC3.46□□□□□ -1.86
COPAP53621 FCF1P8-201ENST00000510322 597 ntBASIC3.46□□□□□ -1.86
COPAP53621 SNORA19.2-201ENST00000516013 114 ntBASIC3.46□□□□□ -1.86
COPAP53621 RNU6-572P-201ENST00000516724 80 ntBASIC3.46□□□□□ -1.86
COPAP53621 SNORA31.19-201ENST00000517079 126 ntBASIC3.46□□□□□ -1.86
COPAP53621 AC026333.2-201ENST00000542164 106 ntBASIC3.46□□□□□ -1.86
COPAP53621 AC090115.3-201ENST00000553218 849 ntBASIC3.46□□□□□ -1.86
COPAP53621 TRAV37-201ENST00000553906 342 ntBASIC3.46□□□□□ -1.86
COPAP53621 MTCO3P23-201ENST00000561363 289 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms