Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.02□□□□□ -2.09
ACLYP53396 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.02□□□□□ -2.09
ACLYP53396 AL009048.1-201ENST00000450437 298 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AL021397.1-201ENST00000451806 248 ntBASIC2.02□□□□□ -2.09
ACLYP53396 RNU6-953P-201ENST00000459154 107 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.02□□□□□ -2.09
ACLYP53396 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AL163540.1-201ENST00000485382 386 ntBASIC2.02□□□□□ -2.09
ACLYP53396 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC018437.1-201ENST00000492214 406 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC108078.2-201ENST00000510750 236 ntBASIC2.02□□□□□ -2.09
ACLYP53396 TRMT112P2-201ENST00000512910 132 ntBASIC2.02□□□□□ -2.09
ACLYP53396 SNORA25.11-201ENST00000515935 105 ntBASIC2.02□□□□□ -2.09
ACLYP53396 ACA59.2-201ENST00000517061 156 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC009902.1-201ENST00000519351 183 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.02□□□□□ -2.09
ACLYP53396 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.02□□□□□ -2.09
ACLYP53396 MIR4303-201ENST00000581299 66 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC068276.1-201ENST00000605793 379 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AL161423.1-201ENST00000613700 262 ntBASIC2.02□□□□□ -2.09
ACLYP53396 AC009233.1-201ENST00000616477 371 ntBASIC2.02□□□□□ -2.09
ACLYP53396 TEX21P-201ENST00000447107 1476 ntBASIC2.01□□□□□ -2.09
ACLYP53396 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.01□□□□□ -2.09
ACLYP53396 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
ACLYP53396 RNU6-1280P-201ENST00000365211 107 ntBASIC2.01□□□□□ -2.09
ACLYP53396 MIR1302-8-201ENST00000408342 128 ntBASIC2.01□□□□□ -2.09
ACLYP53396 HMGB3P2-201ENST00000411913 584 ntBASIC2.01□□□□□ -2.09
ACLYP53396 RPS24P7-201ENST00000416921 246 ntBASIC2.01□□□□□ -2.09
ACLYP53396 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.01□□□□□ -2.09
ACLYP53396 AC097463.2-201ENST00000421074 142 ntBASIC2.01□□□□□ -2.09
ACLYP53396 MTCO2P23-201ENST00000425216 680 ntBASIC2.01□□□□□ -2.09
ACLYP53396 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.01□□□□□ -2.09
ACLYP53396 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.01□□□□□ -2.09
ACLYP53396 MTND1P3-201ENST00000484956 952 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AC023194.1-201ENST00000493084 308 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AC116655.1-201ENST00000508324 901 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.01□□□□□ -2.09
ACLYP53396 MTATP6P9-201ENST00000515039 680 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AC023050.2-201ENST00000544968 387 ntBASIC2.01□□□□□ -2.09
ACLYP53396 SUB1P3-201ENST00000564581 315 ntBASIC2.01□□□□□ -2.09
ACLYP53396 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
ACLYP53396 MIR4307-201ENST00000582802 84 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.01□□□□□ -2.09
ACLYP53396 AC107214.2-201ENST00000608204 634 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AL391834.2-201ENST00000609982 546 ntBASIC2.01□□□□□ -2.09
ACLYP53396 MIR8070-201ENST00000616510 88 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AL512643.1-201ENST00000635735 524 ntBASIC2.01□□□□□ -2.09
ACLYP53396 Z99571.1-201ENST00000636677 394 ntBASIC2.01□□□□□ -2.09
ACLYP53396 AC006927.4-201ENST00000639187 543 ntBASIC2.01□□□□□ -2.09
ACLYP53396 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
ACLYP53396 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.01□□□□□ -2.09
ACLYP53396 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
ACLYP53396 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2□□□□□ -2.09
ACLYP53396 Y_RNA.46-201ENST00000362695 102 ntBASIC2□□□□□ -2.09
ACLYP53396 RNY1P10-201ENST00000363268 113 ntBASIC2□□□□□ -2.09
ACLYP53396 SNORA16B-201ENST00000364674 135 ntBASIC2□□□□□ -2.09
ACLYP53396 RNY3P13-201ENST00000365542 102 ntBASIC2□□□□□ -2.09
ACLYP53396 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ACLYP53396 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
ACLYP53396 AL355497.1-201ENST00000406262 551 ntBASIC2□□□□□ -2.09
ACLYP53396 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2□□□□□ -2.09
ACLYP53396 AL353621.1-201ENST00000418219 243 ntBASIC2□□□□□ -2.09
ACLYP53396 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2□□□□□ -2.09
ACLYP53396 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2□□□□□ -2.09
ACLYP53396 MTND1P32-201ENST00000433043 938 ntBASIC2□□□□□ -2.09
ACLYP53396 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2□□□□□ -2.09
ACLYP53396 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2□□□□□ -2.09
ACLYP53396 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
ACLYP53396 SNORD97-201ENST00000459187 142 ntBASIC2□□□□□ -2.09
ACLYP53396 AC091951.3-201ENST00000504093 246 ntBASIC2□□□□□ -2.09
ACLYP53396 LAMTOR3P2-201ENST00000504479 232 ntBASIC2□□□□□ -2.09
ACLYP53396 RNU6-572P-201ENST00000516724 80 ntBASIC2□□□□□ -2.09
ACLYP53396 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2□□□□□ -2.09
ACLYP53396 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2□□□□□ -2.09
ACLYP53396 AC012213.3-201ENST00000577199 777 ntBASIC2□□□□□ -2.09
ACLYP53396 MIR3146-201ENST00000580367 79 ntBASIC2□□□□□ -2.09
ACLYP53396 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2□□□□□ -2.09
ACLYP53396 AC112187.2-201ENST00000604345 283 ntBASIC2□□□□□ -2.09
ACLYP53396 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2□□□□□ -2.09
ACLYP53396 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2□□□□□ -2.09
ACLYP53396 AL139418.1-201ENST00000613613 177 ntBASIC2□□□□□ -2.09
ACLYP53396 AC009090.3-201ENST00000616553 565 ntBASIC2□□□□□ -2.09
ACLYP53396 AL589994.2-201ENST00000621124 579 ntBASIC2□□□□□ -2.09
ACLYP53396 AC138627.2-201ENST00000624202 601 ntBASIC2□□□□□ -2.09
ACLYP53396 MTND5P42-201ENST00000637720 498 ntBASIC2□□□□□ -2.09
ACLYP53396 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
ACLYP53396 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.99□□□□□ -2.09
ACLYP53396 RNU1-72P-201ENST00000362976 153 ntBASIC1.99□□□□□ -2.09
ACLYP53396 Y_RNA.302-201ENST00000364997 102 ntBASIC1.99□□□□□ -2.09
ACLYP53396 RNU6-898P-201ENST00000365627 104 ntBASIC1.99□□□□□ -2.09
ACLYP53396 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
ACLYP53396 MIR301A-201ENST00000385261 86 ntBASIC1.99□□□□□ -2.09
ACLYP53396 FCF1P10-201ENST00000407590 479 ntBASIC1.99□□□□□ -2.09
ACLYP53396 RNU2-62P-201ENST00000410868 191 ntBASIC1.99□□□□□ -2.09
ACLYP53396 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.99□□□□□ -2.09
ACLYP53396 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.99□□□□□ -2.09
ACLYP53396 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.99□□□□□ -2.09
ACLYP53396 RPS15AP9-201ENST00000439856 381 ntBASIC1.99□□□□□ -2.09
ACLYP53396 AC004854.1-201ENST00000440356 349 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms