Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 OR56A5-201ENST00000340110 738 ntBASIC4.39□□□□□ -1.71
LIG3P49916 MIR423-201ENST00000362201 94 ntBASIC4.39□□□□□ -1.71
LIG3P49916 Y_RNA.123-201ENST00000363338 102 ntBASIC4.39□□□□□ -1.71
LIG3P49916 Y_RNA.214-201ENST00000364201 112 ntBASIC4.39□□□□□ -1.71
LIG3P49916 DEFB109C-201ENST00000382575 264 ntBASIC4.39□□□□□ -1.71
LIG3P49916 DEFB109B-201ENST00000382656 264 ntBASIC4.39□□□□□ -1.71
LIG3P49916 Z98941.1-201ENST00000407764 100 ntBASIC4.39□□□□□ -1.71
LIG3P49916 SNORA11F-201ENST00000408237 128 ntBASIC4.39□□□□□ -1.71
LIG3P49916 U3.37-201ENST00000408528 213 ntBASIC4.39□□□□□ -1.71
LIG3P49916 AC091390.1-201ENST00000433904 331 ntBASIC4.39□□□□□ -1.71
LIG3P49916 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.39□□□□□ -1.71
LIG3P49916 AL645939.1-201ENST00000453429 797 ntBASIC4.39□□□□□ -1.71
LIG3P49916 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.39□□□□□ -1.71
LIG3P49916 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.39□□□□□ -1.71
LIG3P49916 AC010265.1-201ENST00000513509 211 ntBASIC4.39□□□□□ -1.71
LIG3P49916 SNORA31.18-201ENST00000517043 134 ntBASIC4.39□□□□□ -1.71
LIG3P49916 AP004607.1-201ENST00000524456 203 ntBASIC4.39□□□□□ -1.71
LIG3P49916 OR5D17P-201ENST00000531492 978 ntBASIC4.39□□□□□ -1.71
LIG3P49916 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
LIG3P49916 AP004242.1-201ENST00000533701 349 ntBASIC4.39□□□□□ -1.71
LIG3P49916 AC090517.1-201ENST00000569307 266 ntBASIC4.39□□□□□ -1.71
LIG3P49916 MIR4697-201ENST00000582977 78 ntBASIC4.39□□□□□ -1.71
LIG3P49916 MIR3138-201ENST00000585238 82 ntBASIC4.39□□□□□ -1.71
LIG3P49916 AC006077.1-201ENST00000604746 343 ntBASIC4.39□□□□□ -1.71
LIG3P49916 AC008785.1-201ENST00000624475 456 ntBASIC4.39□□□□□ -1.71
LIG3P49916 AC243829.7-201ENST00000633081 225 ntBASIC4.39□□□□□ -1.71
LIG3P49916 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIG3P49916 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LIG3P49916 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
LIG3P49916 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.39□□□□□ -1.71
LIG3P49916 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LIG3P49916 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIG3P49916 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LIG3P49916 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.39□□□□□ -1.71
LIG3P49916 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.38□□□□□ -1.71
LIG3P49916 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIG3P49916 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIG3P49916 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIG3P49916 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.38□□□□□ -1.71
LIG3P49916 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-217P-201ENST00000384164 104 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-472P-201ENST00000384299 107 ntBASIC4.38□□□□□ -1.71
LIG3P49916 Y_RNA.471-201ENST00000384312 102 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-658P-201ENST00000384606 106 ntBASIC4.38□□□□□ -1.71
LIG3P49916 BTF3L4P2-201ENST00000392798 346 ntBASIC4.38□□□□□ -1.71
LIG3P49916 MIR1183-201ENST00000408856 89 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNA5SP129-201ENST00000410276 118 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNA5SP31-201ENST00000411144 127 ntBASIC4.38□□□□□ -1.71
LIG3P49916 ELOCP20-201ENST00000422460 345 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RPL23AP52-201ENST00000439311 478 ntBASIC4.38□□□□□ -1.71
LIG3P49916 Z98949.2-201ENST00000440996 144 ntBASIC4.38□□□□□ -1.71
LIG3P49916 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.38□□□□□ -1.71
LIG3P49916 ABCF2P2-201ENST00000450549 296 ntBASIC4.38□□□□□ -1.71
LIG3P49916 MTATP6P7-201ENST00000453315 681 ntBASIC4.38□□□□□ -1.71
LIG3P49916 AC010618.1-201ENST00000469924 477 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RN7SL812P-201ENST00000493791 279 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RN7SKP122-201ENST00000515923 296 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-397P-201ENST00000516226 104 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-388P-201ENST00000517012 105 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-389P-201ENST00000517048 105 ntBASIC4.38□□□□□ -1.71
LIG3P49916 RNU6-1183P-201ENST00000517054 60 ntBASIC4.38□□□□□ -1.71
LIG3P49916 HSPE1P20-201ENST00000538133 289 ntBASIC4.38□□□□□ -1.71
LIG3P49916 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.38□□□□□ -1.71
LIG3P49916 CYCSP39-201ENST00000565821 309 ntBASIC4.38□□□□□ -1.71
LIG3P49916 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.38□□□□□ -1.71
LIG3P49916 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.38□□□□□ -1.71
LIG3P49916 FTX_3.1-201ENST00000610451 147 ntBASIC4.38□□□□□ -1.71
LIG3P49916 AL442067.1-201ENST00000613261 223 ntBASIC4.38□□□□□ -1.71
LIG3P49916 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LIG3P49916 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.38□□□□□ -1.71
LIG3P49916 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
LIG3P49916 AC140479.6-201ENST00000633535 357 ntBASIC4.38□□□□□ -1.71
LIG3P49916 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIG3P49916 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
LIG3P49916 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.38□□□□□ -1.71
LIG3P49916 AC233263.6-201ENST00000631132 1963 ntBASIC4.38□□□□□ -1.71
LIG3P49916 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LIG3P49916 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
LIG3P49916 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.37□□□□□ -1.71
LIG3P49916 AC022336.2-201ENST00000568966 2538 ntBASIC4.37□□□□□ -1.71
LIG3P49916 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
LIG3P49916 RNU1-76P-201ENST00000362903 159 ntBASIC4.37□□□□□ -1.71
LIG3P49916 RNU6-105P-201ENST00000363909 104 ntBASIC4.37□□□□□ -1.71
LIG3P49916 RNU6-770P-201ENST00000363929 105 ntBASIC4.37□□□□□ -1.71
LIG3P49916 SNORA70.2-201ENST00000364506 135 ntBASIC4.37□□□□□ -1.71
LIG3P49916 SNORA3C-201ENST00000408792 125 ntBASIC4.37□□□□□ -1.71
LIG3P49916 RPL26P27-201ENST00000414397 437 ntBASIC4.37□□□□□ -1.71
LIG3P49916 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG3P49916 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG3P49916 RPL37P4-201ENST00000448908 268 ntBASIC4.37□□□□□ -1.71
LIG3P49916 S100A11P1-201ENST00000477525 312 ntBASIC4.37□□□□□ -1.71
LIG3P49916 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.37□□□□□ -1.71
LIG3P49916 AC006517.1-201ENST00000480485 328 ntBASIC4.37□□□□□ -1.71
LIG3P49916 RPL23AP49-201ENST00000492925 468 ntBASIC4.37□□□□□ -1.71
LIG3P49916 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG3P49916 RNU1-103P-201ENST00000516502 125 ntBASIC4.37□□□□□ -1.71
LIG3P49916 AC109329.1-201ENST00000518744 317 ntBASIC4.37□□□□□ -1.71
LIG3P49916 AC034114.1-201ENST00000520293 285 ntBASIC4.37□□□□□ -1.71
LIG3P49916 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG3P49916 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms