Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SRP9P49458 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.94□□□□□ -2.26
SRP9P49458 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.94□□□□□ -2.26
SRP9P49458 AL441985.1-201ENST00000457727 251 ntBASIC0.94□□□□□ -2.26
SRP9P49458 TMEM251P1-201ENST00000503717 318 ntBASIC0.94□□□□□ -2.26
SRP9P49458 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.94□□□□□ -2.26
SRP9P49458 RNU7-40P-201ENST00000516397 64 ntBASIC0.94□□□□□ -2.26
SRP9P49458 RNU6-678P-201ENST00000516832 109 ntBASIC0.94□□□□□ -2.26
SRP9P49458 AP003122.4-201ENST00000530980 758 ntBASIC0.94□□□□□ -2.26
SRP9P49458 AC090115.3-201ENST00000553218 849 ntBASIC0.94□□□□□ -2.26
SRP9P49458 AC044913.1-201ENST00000557200 430 ntBASIC0.94□□□□□ -2.26
SRP9P49458 AC002400.1-201ENST00000569310 726 ntBASIC0.94□□□□□ -2.26
SRP9P49458 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.94□□□□□ -2.26
SRP9P49458 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
SRP9P49458 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.94□□□□□ -2.26
SRP9P49458 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SRP9P49458 RNU6-1066P-201ENST00000363573 105 ntBASIC0.93□□□□□ -2.26
SRP9P49458 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
SRP9P49458 DHFRP6-201ENST00000401776 268 ntBASIC0.93□□□□□ -2.26
SRP9P49458 AL353621.1-201ENST00000418219 243 ntBASIC0.93□□□□□ -2.26
SRP9P49458 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.93□□□□□ -2.26
SRP9P49458 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.93□□□□□ -2.26
SRP9P49458 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.93□□□□□ -2.26
SRP9P49458 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.93□□□□□ -2.26
SRP9P49458 RPS15AP9-201ENST00000439856 381 ntBASIC0.93□□□□□ -2.26
SRP9P49458 RNFT1P2-201ENST00000443064 757 ntBASIC0.93□□□□□ -2.26
SRP9P49458 GTF2IP12-201ENST00000456547 356 ntBASIC0.93□□□□□ -2.26
SRP9P49458 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.93□□□□□ -2.26
SRP9P49458 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.93□□□□□ -2.26
SRP9P49458 AC022861.1-201ENST00000522981 663 ntBASIC0.93□□□□□ -2.26
SRP9P49458 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.93□□□□□ -2.26
SRP9P49458 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.93□□□□□ -2.26
SRP9P49458 PSMA3P-201ENST00000555485 635 ntBASIC0.93□□□□□ -2.26
SRP9P49458 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.93□□□□□ -2.26
SRP9P49458 ADAM3B-201ENST00000569937 840 ntBASIC0.93□□□□□ -2.26
SRP9P49458 CYP2C61P-201ENST00000604072 290 ntBASIC0.93□□□□□ -2.26
SRP9P49458 AL390208.1-201ENST00000605885 644 ntBASIC0.93□□□□□ -2.26
SRP9P49458 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.93□□□□□ -2.26
SRP9P49458 AL589994.2-201ENST00000621124 579 ntBASIC0.93□□□□□ -2.26
SRP9P49458 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SRP9P49458 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.92□□□□□ -2.26
SRP9P49458 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SRP9P49458 RNU6-28P-201ENST00000362378 107 ntBASIC0.92□□□□□ -2.26
SRP9P49458 RNU6-353P-201ENST00000364266 108 ntBASIC0.92□□□□□ -2.26
SRP9P49458 RNU6-1078P-201ENST00000364522 103 ntBASIC0.92□□□□□ -2.26
SRP9P49458 SNORA70.7-201ENST00000384159 133 ntBASIC0.92□□□□□ -2.26
SRP9P49458 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.92□□□□□ -2.26
SRP9P49458 TAF13P2-201ENST00000416876 286 ntBASIC0.92□□□□□ -2.26
SRP9P49458 AC007435.1-201ENST00000421086 415 ntBASIC0.92□□□□□ -2.26
SRP9P49458 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.92□□□□□ -2.26
SRP9P49458 AC245102.2-201ENST00000448956 180 ntBASIC0.92□□□□□ -2.26
SRP9P49458 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.92□□□□□ -2.26
SRP9P49458 TOMM22P6-201ENST00000465035 409 ntBASIC0.92□□□□□ -2.26
SRP9P49458 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
SRP9P49458 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.92□□□□□ -2.26
SRP9P49458 AC097468.3-201ENST00000607956 456 ntBASIC0.92□□□□□ -2.26
SRP9P49458 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRP9P49458 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRP9P49458 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SRP9P49458 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.91□□□□□ -2.26
SRP9P49458 AC127391.1-201ENST00000411737 98 ntBASIC0.91□□□□□ -2.26
SRP9P49458 AP000275.1-201ENST00000411943 390 ntBASIC0.91□□□□□ -2.26
SRP9P49458 BX119904.4-201ENST00000424402 301 ntBASIC0.91□□□□□ -2.26
SRP9P49458 AC092634.2-201ENST00000428146 1010 ntBASIC0.91□□□□□ -2.26
SRP9P49458 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.91□□□□□ -2.26
SRP9P49458 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 OR6C5P-201ENST00000452388 923 ntBASIC0.91□□□□□ -2.26
SRP9P49458 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 MEMO1P3-201ENST00000459811 302 ntBASIC0.91□□□□□ -2.26
SRP9P49458 AL133373.1-201ENST00000497098 94 ntBASIC0.91□□□□□ -2.26
SRP9P49458 AC025465.3-201ENST00000510570 311 ntBASIC0.91□□□□□ -2.26
SRP9P49458 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
SRP9P49458 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.91□□□□□ -2.26
SRP9P49458 AL355598.1-201ENST00000604169 202 ntBASIC0.91□□□□□ -2.26
SRP9P49458 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.91□□□□□ -2.26
SRP9P49458 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRP9P49458 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
SRP9P49458 RNU2-48P-201ENST00000410694 191 ntBASIC0.9□□□□□ -2.27
SRP9P49458 RNA5SP100-201ENST00000410903 110 ntBASIC0.9□□□□□ -2.27
SRP9P49458 RNA5SP59-201ENST00000410922 110 ntBASIC0.9□□□□□ -2.27
SRP9P49458 PIGPP2-201ENST00000411569 458 ntBASIC0.9□□□□□ -2.27
SRP9P49458 TPMTP3-201ENST00000411928 735 ntBASIC0.9□□□□□ -2.27
SRP9P49458 AL365400.1-201ENST00000431854 640 ntBASIC0.9□□□□□ -2.27
SRP9P49458 RPL36AP53-201ENST00000432891 316 ntBASIC0.9□□□□□ -2.27
SRP9P49458 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.9□□□□□ -2.27
SRP9P49458 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.9□□□□□ -2.27
SRP9P49458 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.9□□□□□ -2.27
SRP9P49458 RPS26P55-201ENST00000471178 356 ntBASIC0.9□□□□□ -2.27
SRP9P49458 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.9□□□□□ -2.27
SRP9P49458 RPL30P7-201ENST00000479312 323 ntBASIC0.9□□□□□ -2.27
SRP9P49458 AC108729.1-201ENST00000487812 947 ntBASIC0.9□□□□□ -2.27
SRP9P49458 RPS3AP22-201ENST00000488297 769 ntBASIC0.9□□□□□ -2.27
SRP9P49458 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.9□□□□□ -2.27
SRP9P49458 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.9□□□□□ -2.27
SRP9P49458 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.9□□□□□ -2.27
SRP9P49458 BNIP3P27-201ENST00000599991 412 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms