Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NEDD4P46934 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
NEDD4P46934 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
NEDD4P46934 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
NEDD4P46934 RNU6-1120P-201ENST00000362988 108 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 RNU6-288P-201ENST00000363690 104 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 SNORA24.1-201ENST00000384401 135 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 MIR301A-201ENST00000385261 86 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 MIR888-201ENST00000401186 77 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 RNU2-68P-201ENST00000410878 191 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 HMGN2P35-201ENST00000412164 270 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD4P46934 AC099548.1-201ENST00000421443 426 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC073464.1-201ENST00000429823 534 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AL591704.1-201ENST00000432574 275 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD4P46934 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD4P46934 CECR9-201ENST00000453421 199 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 snoU13.28-201ENST00000459235 104 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 RPS15AP34-201ENST00000487776 387 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC107401.1-201ENST00000503426 685 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC108078.2-201ENST00000510750 236 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.64□□□□□ -1.99
NEDD4P46934 Y_RNA.689-201ENST00000516589 107 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.64□□□□□ -1.99
NEDD4P46934 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NEDD4P46934 OR4R1P-201ENST00000529879 463 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AP000867.2-201ENST00000532468 320 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 ADI1P3-201ENST00000549509 470 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC078795.2-201ENST00000602835 1252 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 Z84480.1-201ENST00000605131 311 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC004805.2-201ENST00000605382 482 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AL121992.2-201ENST00000606262 256 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC022893.3-201ENST00000607665 437 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC087241.4-201ENST00000612441 480 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD4P46934 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.64□□□□□ -1.99
NEDD4P46934 AP003122.6-201ENST00000623831 495 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 AC005609.4-201ENST00000625071 447 ntBASIC2.64□□□□□ -1.99
NEDD4P46934 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD4P46934 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.63□□□□□ -1.99
NEDD4P46934 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.63□□□□□ -1.99
NEDD4P46934 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD4P46934 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD4P46934 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.63□□□□□ -1.99
NEDD4P46934 RNU4-75P-201ENST00000364621 146 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 Y_RNA.517-201ENST00000384551 106 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 MIR454-201ENST00000390180 115 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 RNA5SP252-201ENST00000391131 119 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD4P46934 AF274854.1-201ENST00000413236 615 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD4P46934 Z98742.3-201ENST00000418637 326 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 CALM2P2-201ENST00000428512 440 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD4P46934 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD4P46934 AL714022.1-201ENST00000439897 151 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 DNAJC19P4-201ENST00000440115 345 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.63□□□□□ -1.99
NEDD4P46934 DPPA3P1-201ENST00000448050 469 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 FABP5P13-201ENST00000452144 328 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD4P46934 AC079382.1-201ENST00000493346 557 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 ANXA2P1-201ENST00000505539 926 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.63□□□□□ -1.99
NEDD4P46934 SUB1P2-201ENST00000556401 297 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AL359212.1-201ENST00000556608 614 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.63□□□□□ -1.99
NEDD4P46934 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NEDD4P46934 AL022154.1-201ENST00000604698 785 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AC007684.1-201ENST00000609671 477 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 DUSP12P1-201ENST00000612874 516 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AC004852.3-201ENST00000614131 326 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AP001486.3-201ENST00000615334 372 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 AL161629.2-201ENST00000615347 275 ntBASIC2.63□□□□□ -1.99
NEDD4P46934 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.62□□□□□ -1.99
NEDD4P46934 ELF2P3-201ENST00000445099 1506 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEDD4P46934 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEDD4P46934 ZNF658B-202ENST00000615961 3375 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 AC103710.2-202ENST00000641454 2853 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
NEDD4P46934 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEDD4P46934 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NEDD4P46934 RNU6-61P-201ENST00000365528 109 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 Y_RNA.367-201ENST00000365544 101 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 RNU4-48P-201ENST00000365559 182 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 RNU1-73P-201ENST00000383971 164 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 RNU6-198P-201ENST00000384258 104 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 Y_RNA.534-201ENST00000384599 112 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 RNU6-606P-201ENST00000384721 111 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 RN7SKP223-201ENST00000410582 62 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 AC007064.1-201ENST00000412238 351 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NEDD4P46934 MTATP6P18-201ENST00000417994 673 ntBASIC2.62□□□□□ -1.99
NEDD4P46934 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.62□□□□□ -1.99
NEDD4P46934 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NEDD4P46934 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.62□□□□□ -1.99
NEDD4P46934 RNU7-23P-201ENST00000459465 62 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms