Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.6□□□□□ -1.99
NKX2-1P43699 RPL21P111-201ENST00000418453 477 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 AL353678.1-201ENST00000422735 741 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.6□□□□□ -1.99
NKX2-1P43699 AL358232.1-201ENST00000448030 501 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 AL133547.1-201ENST00000448546 220 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 TRBVA-201ENST00000498804 316 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 MTCO2P30-201ENST00000503662 364 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 RAC1P5-201ENST00000512182 576 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 RNA5SP385-201ENST00000515947 110 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 RNU1-45P-201ENST00000517191 141 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-1P43699 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-1P43699 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-1P43699 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.6□□□□□ -1.99
NKX2-1P43699 AC007151.1-201ENST00000572774 483 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 MIR548S-201ENST00000581352 82 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 LARP7P1-201ENST00000605576 316 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 AC025253.1-201ENST00000613623 543 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 CR392039.5-201ENST00000623201 510 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 AP003400.5-201ENST00000624827 617 ntBASIC2.6□□□□□ -1.99
NKX2-1P43699 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.6□□□□□ -1.99
NKX2-1P43699 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
NKX2-1P43699 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NKX2-1P43699 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-1P43699 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-1P43699 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
NKX2-1P43699 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.59□□□□□ -1.99
NKX2-1P43699 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
NKX2-1P43699 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 SNORA75B-201ENST00000384053 137 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 MIR578-201ENST00000384828 96 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 RNU6-510P-201ENST00000391239 108 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AL356057.2-201ENST00000403318 432 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AL356776.1-201ENST00000406574 447 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 RNU2-3P-201ENST00000410144 191 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 RNU4-26P-201ENST00000410270 107 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 POLHP1-201ENST00000411806 470 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC007560.1-201ENST00000426912 237 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC009414.1-201ENST00000427200 443 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC018644.1-201ENST00000429934 551 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 RPS12P18-201ENST00000442381 270 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX2-1P43699 MTND4P18-201ENST00000447010 465 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC025518.1-201ENST00000479856 347 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC106707.2-201ENST00000484182 374 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
NKX2-1P43699 SEM1P1-201ENST00000506694 209 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC112206.3-201ENST00000514578 389 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 Y_RNA.665-201ENST00000516177 98 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 RNU6-1069P-201ENST00000516612 133 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 IGKV2-26-201ENST00000518305 343 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX2-1P43699 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC006199.1-201ENST00000548728 219 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AL118558.2-201ENST00000556294 238 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 AC092794.2-201ENST00000620933 563 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 AC009093.8-201ENST00000641769 292 ntBASIC2.59□□□□□ -1.99
NKX2-1P43699 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NKX2-1P43699 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NKX2-1P43699 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.59□□□□□ -2
NKX2-1P43699 ADAM3A-203ENST00000461344 2157 ntBASIC2.59□□□□□ -2
NKX2-1P43699 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.58□□□□□ -2
NKX2-1P43699 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
NKX2-1P43699 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.58□□□□□ -2
NKX2-1P43699 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.58□□□□□ -2
NKX2-1P43699 AC010889.1-201ENST00000566193 2666 ntBASIC2.58□□□□□ -2
NKX2-1P43699 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.58□□□□□ -2
NKX2-1P43699 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
NKX2-1P43699 Y_RNA.303-201ENST00000364998 94 ntBASIC2.58□□□□□ -2
NKX2-1P43699 Z98749.2-208ENST00000381646 500 ntBASIC2.58□□□□□ -2
NKX2-1P43699 SNORD17-201ENST00000390930 237 ntBASIC2.58□□□□□ -2
NKX2-1P43699 EIF4E2P1-201ENST00000393781 255 ntBASIC2.58□□□□□ -2
NKX2-1P43699 AL356967.1-201ENST00000406305 431 ntBASIC2.58□□□□□ -2
NKX2-1P43699 RNA5SP274-201ENST00000410484 108 ntBASIC2.58□□□□□ -2
NKX2-1P43699 Y_RNA.604-201ENST00000410574 102 ntBASIC2.58□□□□□ -2
NKX2-1P43699 RN7SKP123-201ENST00000410732 291 ntBASIC2.58□□□□□ -2
NKX2-1P43699 RAB9AP3-201ENST00000412737 573 ntBASIC2.58□□□□□ -2
NKX2-1P43699 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.58□□□□□ -2
NKX2-1P43699 CYCSP33-201ENST00000414485 327 ntBASIC2.58□□□□□ -2
NKX2-1P43699 BX682237.1-201ENST00000415016 335 ntBASIC2.58□□□□□ -2
NKX2-1P43699 AC009161.1-201ENST00000417306 376 ntBASIC2.58□□□□□ -2
NKX2-1P43699 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.58□□□□□ -2
NKX2-1P43699 AL121601.2-201ENST00000438019 707 ntBASIC2.58□□□□□ -2
NKX2-1P43699 AL353572.1-201ENST00000442490 417 ntBASIC2.58□□□□□ -2
NKX2-1P43699 OSTCP8-201ENST00000445117 448 ntBASIC2.58□□□□□ -2
NKX2-1P43699 RAB9AP1-201ENST00000449393 573 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms