Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SNORD50.1-201ENST00000362987 71 ntBASIC4.21□□□□□ -1.74
CCNFP41002 Y_RNA.489-201ENST00000384410 101 ntBASIC4.21□□□□□ -1.74
CCNFP41002 SNORA11-201ENST00000408789 128 ntBASIC4.21□□□□□ -1.74
CCNFP41002 RNU6-847P-201ENST00000411115 108 ntBASIC4.21□□□□□ -1.74
CCNFP41002 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.21□□□□□ -1.74
CCNFP41002 MTCO3P19-201ENST00000415864 321 ntBASIC4.21□□□□□ -1.74
CCNFP41002 ELOCP20-201ENST00000422460 345 ntBASIC4.21□□□□□ -1.74
CCNFP41002 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.21□□□□□ -1.74
CCNFP41002 AL358472.1-201ENST00000431295 329 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AL512844.2-201ENST00000433990 593 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.21□□□□□ -1.74
CCNFP41002 AC073910.1-201ENST00000445047 438 ntBASIC4.21□□□□□ -1.74
CCNFP41002 RPL23AP81-201ENST00000455252 467 ntBASIC4.21□□□□□ -1.74
CCNFP41002 RNU7-87P-201ENST00000459343 62 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AC093852.1-201ENST00000503587 266 ntBASIC4.21□□□□□ -1.74
CCNFP41002 RNU1-61P-201ENST00000516107 151 ntBASIC4.21□□□□□ -1.74
CCNFP41002 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.21□□□□□ -1.74
CCNFP41002 AC010186.2-204ENST00000537668 439 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AC090517.1-201ENST00000569307 266 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AL390123.1-201ENST00000603216 237 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AC009318.2-201ENST00000610917 651 ntBASIC4.21□□□□□ -1.74
CCNFP41002 AL110115.1-201ENST00000614396 364 ntBASIC4.21□□□□□ -1.74
CCNFP41002 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
CCNFP41002 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.21□□□□□ -1.74
CCNFP41002 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.2□□□□□ -1.74
CCNFP41002 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCNFP41002 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCNFP41002 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCNFP41002 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.2□□□□□ -1.74
CCNFP41002 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.2□□□□□ -1.74
CCNFP41002 Y_RNA.26-201ENST00000362539 101 ntBASIC4.2□□□□□ -1.74
CCNFP41002 Y_RNA.214-201ENST00000364201 112 ntBASIC4.2□□□□□ -1.74
CCNFP41002 RNA5SP509-201ENST00000364577 119 ntBASIC4.2□□□□□ -1.74
CCNFP41002 RNU6-806P-201ENST00000365147 105 ntBASIC4.2□□□□□ -1.74
CCNFP41002 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNFP41002 RNU6-658P-201ENST00000384606 106 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.2□□□□□ -1.74
CCNFP41002 MTCO3P29-201ENST00000432119 779 ntBASIC4.2□□□□□ -1.74
CCNFP41002 HIGD1AP2-201ENST00000446367 280 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AC011276.1-201ENST00000469688 323 ntBASIC4.2□□□□□ -1.74
CCNFP41002 RN7SL303P-201ENST00000469773 251 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNFP41002 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNFP41002 AC008958.1-201ENST00000511047 682 ntBASIC4.2□□□□□ -1.74
CCNFP41002 SNORA25.11-201ENST00000515935 105 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AL590705.4-201ENST00000532209 134 ntBASIC4.2□□□□□ -1.74
CCNFP41002 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNFP41002 ZNF192P1-203ENST00000565888 810 ntBASIC4.2□□□□□ -1.74
CCNFP41002 MIR4277-201ENST00000578298 84 ntBASIC4.2□□□□□ -1.74
CCNFP41002 MIR5701-3-201ENST00000578890 82 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AC023575.1-201ENST00000580510 358 ntBASIC4.2□□□□□ -1.74
CCNFP41002 MIR5701-1-201ENST00000585138 82 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AL442067.1-201ENST00000613261 223 ntBASIC4.2□□□□□ -1.74
CCNFP41002 MIR5701-2-201ENST00000615634 82 ntBASIC4.2□□□□□ -1.74
CCNFP41002 AL159153.1-201ENST00000619688 317 ntBASIC4.2□□□□□ -1.74
CCNFP41002 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.2□□□□□ -1.74
CCNFP41002 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNFP41002 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
CCNFP41002 AC118273.1-201ENST00000525324 3006 ntBASIC4.19□□□□□ -1.74
CCNFP41002 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNFP41002 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNFP41002 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNFP41002 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNFP41002 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNFP41002 Y_RNA.19-201ENST00000362462 99 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RNU6-227P-201ENST00000362865 103 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RNU6-527P-201ENST00000363425 104 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RNA5SP322-201ENST00000363617 119 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RNU6-336P-201ENST00000364891 107 ntBASIC4.19□□□□□ -1.74
CCNFP41002 Y_RNA.471-201ENST00000384312 102 ntBASIC4.19□□□□□ -1.74
CCNFP41002 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNFP41002 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNFP41002 AL356968.1-201ENST00000416622 474 ntBASIC4.19□□□□□ -1.74
CCNFP41002 YPEL5P1-201ENST00000419731 367 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RPL23AP52-201ENST00000439311 478 ntBASIC4.19□□□□□ -1.74
CCNFP41002 Z98949.2-201ENST00000440996 144 ntBASIC4.19□□□□□ -1.74
CCNFP41002 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCNFP41002 HMGN2P16-201ENST00000456802 261 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RPL31P61-201ENST00000496160 376 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RNU6-1143P-201ENST00000516125 104 ntBASIC4.19□□□□□ -1.74
CCNFP41002 RNA5SP73-201ENST00000516744 108 ntBASIC4.19□□□□□ -1.74
CCNFP41002 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
CCNFP41002 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNFP41002 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.19□□□□□ -1.74
CCNFP41002 AC136624.4-201ENST00000573044 370 ntBASIC4.19□□□□□ -1.74
CCNFP41002 FAM27D1-201ENST00000612308 341 ntBASIC4.19□□□□□ -1.74
CCNFP41002 AC097372.5-201ENST00000623665 376 ntBASIC4.19□□□□□ -1.74
CCNFP41002 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CCNFP41002 AC233263.6-201ENST00000631132 1963 ntBASIC4.19□□□□□ -1.74
CCNFP41002 AL133383.2-201ENST00000622958 2336 ntBASIC4.19□□□□□ -1.74
CCNFP41002 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.19□□□□□ -1.74
CCNFP41002 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNFP41002 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CCNFP41002 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCNFP41002 HSPA8P1-201ENST00000425843 1833 ntBASIC4.18□□□□□ -1.74
CCNFP41002 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CCNFP41002 AC022336.2-201ENST00000568966 2538 ntBASIC4.18□□□□□ -1.74
CCNFP41002 FTLP6-201ENST00000355274 422 ntBASIC4.18□□□□□ -1.74
CCNFP41002 RNU6-78P-201ENST00000362897 107 ntBASIC4.18□□□□□ -1.74
CCNFP41002 Y_RNA.447-201ENST00000384184 113 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms