Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HADHAP40939 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HADHAP40939 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
HADHAP40939 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.93□□□□□ -1.94
HADHAP40939 MTND5P30-201ENST00000452896 1731 ntBASIC2.93□□□□□ -1.94
HADHAP40939 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HADHAP40939 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HADHAP40939 RNU6-7-201ENST00000364784 107 ntBASIC2.93□□□□□ -1.94
HADHAP40939 RNU6-8-201ENST00000365467 107 ntBASIC2.93□□□□□ -1.94
HADHAP40939 RNU6-116P-201ENST00000384042 109 ntBASIC2.93□□□□□ -1.94
HADHAP40939 Y_RNA.481-201ENST00000384373 102 ntBASIC2.93□□□□□ -1.94
HADHAP40939 RNU6-1179P-201ENST00000384667 107 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AL353621.1-201ENST00000418219 243 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.93□□□□□ -1.94
HADHAP40939 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
HADHAP40939 RPS15AP9-201ENST00000439856 381 ntBASIC2.93□□□□□ -1.94
HADHAP40939 DNAJC19P4-201ENST00000440115 345 ntBASIC2.93□□□□□ -1.94
HADHAP40939 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
HADHAP40939 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.93□□□□□ -1.94
HADHAP40939 RPS29P15-201ENST00000458329 171 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AC107626.1-201ENST00000471084 183 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AL049873.1-201ENST00000480540 376 ntBASIC2.93□□□□□ -1.94
HADHAP40939 MTAPP1-201ENST00000489154 819 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AC107401.1-201ENST00000503426 685 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AC116655.1-201ENST00000508324 901 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.93□□□□□ -1.94
HADHAP40939 EIF4BP1-201ENST00000554881 351 ntBASIC2.93□□□□□ -1.94
HADHAP40939 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.93□□□□□ -1.94
HADHAP40939 AC103987.3-201ENST00000582071 292 ntBASIC2.93□□□□□ -1.94
HADHAP40939 MIR3941-201ENST00000582572 103 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AL391646.1-201ENST00000603860 190 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AL136363.2-201ENST00000604173 851 ntBASIC2.93□□□□□ -1.94
HADHAP40939 AP000787.2-201ENST00000604432 568 ntBASIC2.93□□□□□ -1.94
HADHAP40939 HULC.1-201ENST00000612720 240 ntBASIC2.93□□□□□ -1.94
HADHAP40939 RMST_4.1-201ENST00000616886 107 ntBASIC2.93□□□□□ -1.94
HADHAP40939 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.93□□□□□ -1.94
HADHAP40939 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.93□□□□□ -1.94
HADHAP40939 HSPA8P4-201ENST00000511877 1920 ntBASIC2.93□□□□□ -1.94
HADHAP40939 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HADHAP40939 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HADHAP40939 AC004520.1-201ENST00000608362 1413 ntBASIC2.93□□□□□ -1.94
HADHAP40939 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HADHAP40939 AC096644.4-201ENST00000563417 2912 ntBASIC2.92□□□□□ -1.94
HADHAP40939 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.92□□□□□ -1.94
HADHAP40939 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.92□□□□□ -1.94
HADHAP40939 RNU6-461P-201ENST00000364195 107 ntBASIC2.92□□□□□ -1.94
HADHAP40939 RNU6-517P-201ENST00000384362 110 ntBASIC2.92□□□□□ -1.94
HADHAP40939 SNORA44-201ENST00000384584 132 ntBASIC2.92□□□□□ -1.94
HADHAP40939 MIR578-201ENST00000384828 96 ntBASIC2.92□□□□□ -1.94
HADHAP40939 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HADHAP40939 U3.37-201ENST00000408528 213 ntBASIC2.92□□□□□ -1.94
HADHAP40939 RNU2-9P-201ENST00000410194 145 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AC016907.1-201ENST00000419483 435 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.92□□□□□ -1.94
HADHAP40939 MICF-203ENST00000432679 129 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.92□□□□□ -1.94
HADHAP40939 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.92□□□□□ -1.94
HADHAP40939 AL360271.2-201ENST00000447710 161 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AC233279.1-201ENST00000455300 423 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AC006026.2-201ENST00000457376 180 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AL162395.1-201ENST00000457882 422 ntBASIC2.92□□□□□ -1.94
HADHAP40939 RNU7-63P-201ENST00000459054 62 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AP001486.1-201ENST00000463339 476 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AC006512.1-201ENST00000468816 291 ntBASIC2.92□□□□□ -1.94
HADHAP40939 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.92□□□□□ -1.94
HADHAP40939 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.92□□□□□ -1.94
HADHAP40939 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.92□□□□□ -1.94
HADHAP40939 COX6CP5-201ENST00000527162 228 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AC092325.1-201ENST00000566449 554 ntBASIC2.92□□□□□ -1.94
HADHAP40939 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.92□□□□□ -1.94
HADHAP40939 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.92□□□□□ -1.94
HADHAP40939 AC069234.5-201ENST00000611056 416 ntBASIC2.92□□□□□ -1.94
HADHAP40939 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.92□□□□□ -1.94
HADHAP40939 SCARNA4-202ENST00000625402 129 ntBASIC2.92□□□□□ -1.94
HADHAP40939 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HADHAP40939 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HADHAP40939 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
HADHAP40939 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.91□□□□□ -1.94
HADHAP40939 SNORD14B-201ENST00000364533 90 ntBASIC2.91□□□□□ -1.94
HADHAP40939 RNU6-898P-201ENST00000365627 104 ntBASIC2.91□□□□□ -1.94
HADHAP40939 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
HADHAP40939 MIR147B-201ENST00000390185 80 ntBASIC2.91□□□□□ -1.94
HADHAP40939 AL139039.1-201ENST00000401900 692 ntBASIC2.91□□□□□ -1.94
HADHAP40939 RAP1BP3-201ENST00000407180 549 ntBASIC2.91□□□□□ -1.94
HADHAP40939 MTCO3P41-201ENST00000414801 328 ntBASIC2.91□□□□□ -1.94
HADHAP40939 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.91□□□□□ -1.94
HADHAP40939 RPL21P90-201ENST00000415692 466 ntBASIC2.91□□□□□ -1.94
HADHAP40939 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.91□□□□□ -1.94
HADHAP40939 TOMM20P4-201ENST00000427861 435 ntBASIC2.91□□□□□ -1.94
HADHAP40939 AL451074.3-201ENST00000437709 472 ntBASIC2.91□□□□□ -1.94
HADHAP40939 RPL39P40-201ENST00000445481 146 ntBASIC2.91□□□□□ -1.94
HADHAP40939 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.91□□□□□ -1.94
HADHAP40939 AC092001.1-201ENST00000453012 261 ntBASIC2.91□□□□□ -1.94
HADHAP40939 SNORA59A-201ENST00000459326 152 ntBASIC2.91□□□□□ -1.94
HADHAP40939 FAM92A1P2-202ENST00000504766 877 ntBASIC2.91□□□□□ -1.94
HADHAP40939 MIR892C-201ENST00000516410 77 ntBASIC2.91□□□□□ -1.94
HADHAP40939 SNORA31.18-201ENST00000517043 134 ntBASIC2.91□□□□□ -1.94
HADHAP40939 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.91□□□□□ -1.94
HADHAP40939 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.91□□□□□ -1.94
HADHAP40939 AC005261.5-201ENST00000596280 355 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms