Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3□□□□□ -1.93
HOXC8P31273 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3□□□□□ -1.93
HOXC8P31273 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3□□□□□ -1.93
HOXC8P31273 RNU6-1281P-201ENST00000516223 105 ntBASIC3□□□□□ -1.93
HOXC8P31273 RNU7-51P-201ENST00000516560 62 ntBASIC3□□□□□ -1.93
HOXC8P31273 AC245166.1-201ENST00000521012 253 ntBASIC3□□□□□ -1.93
HOXC8P31273 AC104383.1-201ENST00000530297 370 ntBASIC3□□□□□ -1.93
HOXC8P31273 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3□□□□□ -1.93
HOXC8P31273 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3□□□□□ -1.93
HOXC8P31273 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3□□□□□ -1.93
HOXC8P31273 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3□□□□□ -1.93
HOXC8P31273 AC025281.1-201ENST00000567026 265 ntBASIC3□□□□□ -1.93
HOXC8P31273 HMGN2P15-201ENST00000585707 270 ntBASIC3□□□□□ -1.93
HOXC8P31273 AC020895.1-201ENST00000595362 272 ntBASIC3□□□□□ -1.93
HOXC8P31273 AP002360.4-201ENST00000606980 481 ntBASIC3□□□□□ -1.93
HOXC8P31273 AC090617.7-201ENST00000623952 126 ntBASIC3□□□□□ -1.93
HOXC8P31273 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3□□□□□ -1.93
HOXC8P31273 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3□□□□□ -1.93
HOXC8P31273 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HOXC8P31273 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC8P31273 ZNF680P1-201ENST00000436625 1469 ntBASIC3□□□□□ -1.93
HOXC8P31273 ZNF519P1-201ENST00000449011 1626 ntBASIC3□□□□□ -1.93
HOXC8P31273 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
HOXC8P31273 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC8P31273 HSPE1P11-201ENST00000339579 310 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC8P31273 RNU6-188P-201ENST00000364207 107 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RNU6-1322P-201ENST00000364309 107 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RNU6-534P-201ENST00000364877 106 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 Y_RNA.367-201ENST00000365544 101 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RNU6-641P-201ENST00000384006 107 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RNY3P14-201ENST00000384309 102 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 MIR558-201ENST00000384920 94 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RPL21P3-201ENST00000395517 478 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AL591416.1-201ENST00000404015 867 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC022028.1-201ENST00000412054 408 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 SDCBPP3-201ENST00000419629 891 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 AC104332.2-201ENST00000429959 156 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RPL32P28-201ENST00000443577 397 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 DPPA3P1-201ENST00000448050 469 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 AC146507.2-201ENST00000460608 476 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RN7SL75P-201ENST00000461926 281 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RPL31P58-201ENST00000469001 379 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 SUMO2P6-201ENST00000505273 288 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 PRDX4P1-201ENST00000507189 574 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 AC010486.1-201ENST00000511793 424 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 RNA5SP165-201ENST00000517142 115 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.99□□□□□ -1.93
HOXC8P31273 AC007536.1-201ENST00000533382 349 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AL161798.1-201ENST00000604630 131 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AL589994.2-201ENST00000621124 579 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 AC002064.3-201ENST00000623448 346 ntBASIC2.99□□□□□ -1.93
HOXC8P31273 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.99□□□□□ -1.93
HOXC8P31273 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC8P31273 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC8P31273 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC8P31273 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC8P31273 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HOXC8P31273 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HOXC8P31273 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HOXC8P31273 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.98□□□□□ -1.93
HOXC8P31273 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 Y_RNA.38-201ENST00000362617 102 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 RNU6-512P-201ENST00000364438 103 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 Y_RNA.481-201ENST00000384373 102 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 Y_RNA.573-201ENST00000384763 105 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 RNU6-1158P-201ENST00000391167 107 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AL139039.1-201ENST00000401900 692 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AL139095.1-201ENST00000404326 391 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AL078595.1-201ENST00000404458 226 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC8P31273 HMGB1P31-201ENST00000437242 427 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC8P31273 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC8P31273 AC022364.2-201ENST00000457963 554 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC006512.1-201ENST00000468816 291 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 RPL36AP51-201ENST00000487216 318 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 RNA5SP385-201ENST00000515947 110 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC8P31273 AC022634.1-201ENST00000520765 532 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC091544.4-201ENST00000555268 342 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC8P31273 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.98□□□□□ -1.93
HOXC8P31273 MIR548S-201ENST00000581352 82 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC8P31273 AC104763.2-201ENST00000604179 382 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AL355073.2-201ENST00000612106 557 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC002553.4-201ENST00000616896 331 ntBASIC2.98□□□□□ -1.93
HOXC8P31273 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC8P31273 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC8P31273 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.98□□□□□ -1.93
HOXC8P31273 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms