Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-1315P-201ENST00000517187 99 ntBASIC3.03□□□□□ -1.92
HOXA13P31271 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA13P31271 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.03□□□□□ -1.92
HOXA13P31271 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HOXA13P31271 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.03□□□□□ -1.92
HOXA13P31271 AP003072.2-201ENST00000527756 676 ntBASIC3.03□□□□□ -1.92
HOXA13P31271 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.03□□□□□ -1.92
HOXA13P31271 MIR4635-201ENST00000583759 79 ntBASIC3.03□□□□□ -1.92
HOXA13P31271 AC008521.1-201ENST00000587471 187 ntBASIC3.03□□□□□ -1.92
HOXA13P31271 AL355598.1-201ENST00000604169 202 ntBASIC3.03□□□□□ -1.92
HOXA13P31271 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXA13P31271 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.03□□□□□ -1.92
HOXA13P31271 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HOXA13P31271 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.93
HOXA13P31271 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
HOXA13P31271 AC103710.2-202ENST00000641454 2853 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXA13P31271 RNU6-1120P-201ENST00000362988 108 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 Y_RNA.303-201ENST00000364998 94 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 SNORD115-7-201ENST00000365306 82 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 RNU4-48P-201ENST00000365559 182 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 RNU6-483P-201ENST00000384088 108 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 Y_RNA.534-201ENST00000384599 112 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HOXA13P31271 AL160275.3-201ENST00000423876 471 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AL591704.1-201ENST00000432574 275 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 MTATP6P23-201ENST00000440153 476 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 MTND4P18-201ENST00000447010 465 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AL162395.1-201ENST00000457882 422 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 MTAPP1-201ENST00000489154 819 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXA13P31271 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.02□□□□□ -1.93
HOXA13P31271 AC096725.1-201ENST00000514266 313 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXA13P31271 AC025755.1-201ENST00000521306 278 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXA13P31271 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXA13P31271 OR5AQ1P-201ENST00000527596 927 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXA13P31271 ZNF519P2-201ENST00000557032 169 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.02□□□□□ -1.93
HOXA13P31271 HMGB1P33-201ENST00000563485 527 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 MIR4513-201ENST00000581077 86 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXA13P31271 AC012507.3-201ENST00000603556 477 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AL355073.2-201ENST00000612106 557 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.02□□□□□ -1.93
HOXA13P31271 AC139792.3-201ENST00000623525 224 ntBASIC3.02□□□□□ -1.93
HOXA13P31271 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HOXA13P31271 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
HOXA13P31271 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXA13P31271 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA13P31271 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HOXA13P31271 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 Y_RNA.33-201ENST00000362591 102 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 RNU6-1029P-201ENST00000384109 107 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 RNY3P14-201ENST00000384309 102 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AL356057.2-201ENST00000403318 432 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AL591416.1-201ENST00000404015 867 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 CIR1P3-201ENST00000405137 479 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 NDUFS5P4-201ENST00000412983 318 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 RPL26P27-201ENST00000414397 437 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 MTND4LP11-201ENST00000422184 280 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA13P31271 RPS15AP5-201ENST00000436276 388 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA13P31271 MTND1P18-201ENST00000448191 573 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 FDX1P2-201ENST00000450769 375 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA13P31271 SRIP1-201ENST00000489235 288 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA13P31271 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXA13P31271 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA13P31271 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXA13P31271 AC114781.4-201ENST00000513707 639 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 RNU6-572P-201ENST00000516724 80 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AP003122.3-201ENST00000526316 255 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC084851.1-201ENST00000529105 249 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA13P31271 NACAP3-201ENST00000552100 481 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AL157871.3-201ENST00000557231 293 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
HOXA13P31271 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.01□□□□□ -1.93
HOXA13P31271 AL138889.2-201ENST00000603883 242 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AP000907.4-201ENST00000604143 237 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 MIR6817-201ENST00000615588 66 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC092608.2-201ENST00000624427 218 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC110079.1-202ENST00000635213 138 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXA13P31271 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 ZNF680P1-201ENST00000436625 1469 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 ADAM3A-203ENST00000461344 2157 ntBASIC3.01□□□□□ -1.93
HOXA13P31271 AC010680.1-201ENST00000590024 3590 ntBASIC3□□□□□ -1.93
HOXA13P31271 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3□□□□□ -1.93
HOXA13P31271 MTND5P27-201ENST00000428871 1720 ntBASIC3□□□□□ -1.93
HOXA13P31271 NACAP2-201ENST00000318548 624 ntBASIC3□□□□□ -1.93
HOXA13P31271 RNA5SP68-201ENST00000363885 119 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms