Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RNU5E-5P-201ENST00000365379 116 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RNU6-744P-201ENST00000365557 107 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RNU6-1103P-201ENST00000384150 107 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RNU6-1316P-201ENST00000384242 108 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RNU6-517P-201ENST00000384362 110 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 Y_RNA.548-201ENST00000384656 105 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RNU2-20P-201ENST00000410425 191 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AL359704.1-201ENST00000411586 781 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 FCF1P9-201ENST00000412546 282 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RPS3AP9-201ENST00000417027 792 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A1P20908 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A1P20908 MTND3P21-201ENST00000433774 331 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC009961.2-201ENST00000435771 251 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 TIMM9P1-201ENST00000436122 256 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RSU1P2-202ENST00000437884 485 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.69□□□□□ -2.14
COL5A1P20908 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A1P20908 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AP1S2P1-201ENST00000457344 379 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A1P20908 RPL23AP55-201ENST00000498163 452 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 SEM1P1-201ENST00000506694 209 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A1P20908 MTCO3P44-201ENST00000510977 541 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A1P20908 AP003497.1-201ENST00000528472 562 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A1P20908 ZNF519P3-201ENST00000557158 1032 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A1P20908 AC136619.2-201ENST00000563361 631 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC107954.1-201ENST00000565906 727 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.69□□□□□ -2.14
COL5A1P20908 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A1P20908 AP001506.1-201ENST00000615444 211 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 AC072046.2-201ENST00000618366 268 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.69□□□□□ -2.14
COL5A1P20908 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A1P20908 OR5AK4P-201ENST00000635912 903 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL5A1P20908 FARSBP1-201ENST00000435808 1778 ntBASIC1.69□□□□□ -2.14
COL5A1P20908 RNU6-28P-201ENST00000362378 107 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RNA5SP258-201ENST00000362750 119 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 U8.3-201ENST00000363321 132 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RNU6-359P-201ENST00000365466 108 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 Y_RNA.559-201ENST00000384686 107 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MIR1-2-201ENST00000384961 85 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RNU4-65P-201ENST00000410473 140 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 HMGB3P2-201ENST00000411913 584 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RPS3AP3-201ENST00000411933 242 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MTND1P21-201ENST00000412991 285 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 UBE2V1P10-201ENST00000414685 269 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MTATP6P27-201ENST00000416987 621 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.68□□□□□ -2.14
COL5A1P20908 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.68□□□□□ -2.14
COL5A1P20908 AL445669.1-201ENST00000426743 755 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 HMGB1P27-201ENST00000431429 603 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A1P20908 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL5A1P20908 RPS4XP11-201ENST00000446897 772 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 DPPA3P1-201ENST00000448050 469 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 PPP1R2P5-201ENST00000457256 603 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RBM43P1-201ENST00000476891 1081 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC114797.1-201ENST00000514003 728 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 SNORA18.6-201ENST00000516792 115 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 IGKV2D-36-201ENST00000518643 226 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC022861.1-201ENST00000522981 663 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC055876.5-201ENST00000605667 259 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC090186.1-201ENST00000605991 572 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MIR6895-201ENST00000613497 78 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC104010.1-201ENST00000616889 150 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 PVT1_3.1-201ENST00000620853 95 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A1P20908 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
COL5A1P20908 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL5A1P20908 AC008568.2-201ENST00000623862 2313 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.68□□□□□ -2.14
COL5A1P20908 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL5A1P20908 NUP58P1-201ENST00000502546 1738 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RNU4-1-201ENST00000363925 141 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 Y_RNA.296-201ENST00000364930 108 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 Y_RNA.374-201ENST00000365606 101 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 SNORA75-201ENST00000384158 137 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MIR144-201ENST00000384886 86 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
COL5A1P20908 TXNP7-201ENST00000406296 293 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 RNU2-16P-201ENST00000410712 136 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.68□□□□□ -2.14
COL5A1P20908 BEND7P1-201ENST00000422058 457 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 MTND1P34-201ENST00000438556 671 ntBASIC1.68□□□□□ -2.14
COL5A1P20908 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.68□□□□□ -2.14
COL5A1P20908 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms