Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 OR5B19P-201ENST00000531766 928 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AP000889.2-201ENST00000532684 490 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.26□□□□□ -2.05
XRCC1P18887 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.26□□□□□ -2.05
XRCC1P18887 AC109446.2-201ENST00000567872 497 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.26□□□□□ -2.05
XRCC1P18887 MIR548AB-201ENST00000584917 84 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 AL139286.2-201ENST00000606838 396 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.26□□□□□ -2.05
XRCC1P18887 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.26□□□□□ -2.05
XRCC1P18887 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
XRCC1P18887 CDC27P3-201ENST00000635418 1910 ntBASIC2.26□□□□□ -2.05
XRCC1P18887 CKAP2P1-201ENST00000555477 2049 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
XRCC1P18887 MTND4P27-201ENST00000450813 1354 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
XRCC1P18887 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
XRCC1P18887 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
XRCC1P18887 SNORA20.2-201ENST00000383922 131 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 MIR524-201ENST00000385242 87 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 SNORA40C-201ENST00000391285 128 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 RNU6-1025P-201ENST00000410629 104 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC127391.1-201ENST00000411737 98 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 HMGN1P14-201ENST00000412459 517 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.25□□□□□ -2.05
XRCC1P18887 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.25□□□□□ -2.05
XRCC1P18887 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC007283.2-201ENST00000424739 197 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 PTGES3P4-201ENST00000426243 356 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AL078601.1-201ENST00000444542 271 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
XRCC1P18887 FABP5P13-201ENST00000452144 328 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC233279.1-201ENST00000455300 423 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.25□□□□□ -2.05
XRCC1P18887 AC104435.1-201ENST00000483483 166 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 RPL23AP49-201ENST00000492925 468 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.25□□□□□ -2.05
XRCC1P18887 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.25□□□□□ -2.05
XRCC1P18887 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.25□□□□□ -2.05
XRCC1P18887 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.25□□□□□ -2.05
XRCC1P18887 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.25□□□□□ -2.05
XRCC1P18887 Vault.3-201ENST00000516676 95 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 SNORA31.19-201ENST00000517079 126 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC022616.3-201ENST00000523940 148 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.25□□□□□ -2.05
XRCC1P18887 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.25□□□□□ -2.05
XRCC1P18887 ADI1P3-201ENST00000549509 470 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 SNRPGP18-201ENST00000553000 214 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC105137.2-201ENST00000569073 466 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.25□□□□□ -2.05
XRCC1P18887 NRBF2P1-201ENST00000587407 859 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AL133173.2-201ENST00000614270 90 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AC008250.2-201ENST00000615261 205 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 AP001506.1-201ENST00000615444 211 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.25□□□□□ -2.05
XRCC1P18887 PISRT1-201ENST00000626175 531 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 MIR203B-201ENST00000636080 86 ntBASIC2.25□□□□□ -2.05
XRCC1P18887 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
XRCC1P18887 AC103710.2-202ENST00000641454 2853 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 FARSBP1-201ENST00000435808 1778 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.24□□□□□ -2.05
XRCC1P18887 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.24□□□□□ -2.05
XRCC1P18887 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
XRCC1P18887 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 U8.3-201ENST00000363321 132 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 RNU6-39P-201ENST00000384344 107 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 RNU6-748P-201ENST00000384648 107 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 RNY3P10-201ENST00000384764 102 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 MIR147B-201ENST00000390185 80 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 SNORA26.8-201ENST00000391306 124 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
XRCC1P18887 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
XRCC1P18887 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.24□□□□□ -2.05
XRCC1P18887 OR51A5P-201ENST00000415429 942 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 AC092809.3-201ENST00000415453 231 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.24□□□□□ -2.05
XRCC1P18887 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.24□□□□□ -2.05
XRCC1P18887 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.24□□□□□ -2.05
XRCC1P18887 AL031659.1-201ENST00000447075 539 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 EIF4EP3-201ENST00000498782 656 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
XRCC1P18887 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 BTF3P12-201ENST00000519620 469 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.24□□□□□ -2.05
XRCC1P18887 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.24□□□□□ -2.05
XRCC1P18887 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
XRCC1P18887 AC005771.1-201ENST00000585581 349 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 AL022154.1-201ENST00000604698 785 ntBASIC2.24□□□□□ -2.05
XRCC1P18887 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.24□□□□□ -2.05
XRCC1P18887 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
XRCC1P18887 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
XRCC1P18887 AC080128.1-201ENST00000474389 1917 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 FGF7P2-201ENST00000332473 296 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
XRCC1P18887 RNU6-1280P-201ENST00000365211 107 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 Z98749.2-208ENST00000381646 500 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
XRCC1P18887 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms