Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.31□□□□□ -2.36
COL6A3P12111 AL109918.3-201ENST00000603072 338 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 AL391834.1-201ENST00000609609 560 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
COL6A3P12111 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 MIR1250-201ENST00000408098 113 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 RNU6-193P-201ENST00000410977 107 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A3P12111 AC015908.1-201ENST00000478739 476 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A3P12111 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A3P12111 AC133963.2-201ENST00000513686 578 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.31□□□□□ -2.36
COL6A3P12111 AC106800.4-201ENST00000614905 153 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 AC103705.1-201ENST00000619013 241 ntBASIC0.31□□□□□ -2.36
COL6A3P12111 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.31□□□□□ -2.36
COL6A3P12111 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
COL6A3P12111 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC006026.2-201ENST00000457376 180 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 RNU6-953P-201ENST00000459154 107 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC118273.2-201ENST00000532092 465 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.3□□□□□ -2.36
COL6A3P12111 CENPUP2-201ENST00000555897 1186 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC090888.1-201ENST00000561335 1141 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AL355472.4-201ENST00000610233 626 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AL590282.1-201ENST00000610379 1136 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
COL6A3P12111 RNU6-360P-201ENST00000390944 104 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 RPS4XP3-201ENST00000398541 413 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AL136372.1-201ENST00000403060 228 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AL606490.4-201ENST00000423117 127 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.3□□□□□ -2.36
COL6A3P12111 AP000797.1-201ENST00000478870 387 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 LARP7P4-201ENST00000481075 878 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.3□□□□□ -2.36
COL6A3P12111 AC011406.1-201ENST00000512440 370 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 RNU2-19P-201ENST00000517288 84 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.3□□□□□ -2.36
COL6A3P12111 AC025627.3-201ENST00000582078 182 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 AC069304.3-201ENST00000603938 1084 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.3□□□□□ -2.36
COL6A3P12111 AC020923.1-201ENST00000624021 917 ntBASIC0.3□□□□□ -2.36
COL6A3P12111 RNU1-105P-201ENST00000363470 161 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 MT-TP-201ENST00000387461 68 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
COL6A3P12111 AL356421.1-201ENST00000403255 413 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 RNU6-920P-201ENST00000410926 92 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 RNU6-575P-201ENST00000411326 105 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.29□□□□□ -2.36
COL6A3P12111 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 AC243960.4-201ENST00000600532 288 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AL773524.1-201ENST00000614065 229 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC068647.2-201ENST00000637380 353 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
COL6A3P12111 SNORA8-201ENST00000384574 139 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 RAP1BP3-201ENST00000407180 549 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 OFD1P3Y-201ENST00000453312 783 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC134050.1-201ENST00000495088 933 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 SNRPGP16-201ENST00000533275 226 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC090666.1-201ENST00000578241 445 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC078899.2-201ENST00000595282 212 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC121334.2-201ENST00000605387 271 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 AL161629.2-201ENST00000615347 275 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AC096656.1-201ENST00000623826 1364 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
COL6A3P12111 SNORD114-28-201ENST00000363610 72 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 MTND4LP21-201ENST00000415303 295 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 UBE2D3P2-201ENST00000424409 445 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.29□□□□□ -2.36
COL6A3P12111 AL157398.1-201ENST00000452981 186 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
COL6A3P12111 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.29□□□□□ -2.36
COL6A3P12111 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 AC007038.2-201ENST00000608095 740 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.29□□□□□ -2.36
COL6A3P12111 AC093838.1-201ENST00000613014 469 ntBASIC0.29□□□□□ -2.36
COL6A3P12111 Y_RNA.533-201ENST00000384596 114 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 Y_RNA.566-201ENST00000384735 101 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 MIR100-201ENST00000385259 80 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.28□□□□□ -2.36
COL6A3P12111 OR51AB1P-201ENST00000429046 620 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.28□□□□□ -2.36
COL6A3P12111 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
COL6A3P12111 AC107954.1-201ENST00000565906 727 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 FAM60BP-201ENST00000578364 658 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 MIR4768-201ENST00000585270 74 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 VN1R81P-201ENST00000602085 372 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 AC025165.5-201ENST00000602802 578 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
COL6A3P12111 Z75746.1-201ENST00000440243 2080 ntBASIC0.28□□□□□ -2.36
COL6A3P12111 MIR126-201ENST00000362291 85 ntBASIC0.28□□□□□ -2.37
COL6A3P12111 RNA5SP361-201ENST00000362686 118 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms