Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
TOP2AP11388 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.01□□□□□ -2.41
TOP2AP11388 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
TOP2AP11388 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.01□□□□□ -2.41
TOP2AP11388 AP003034.1-201ENST00000534621 422 ntBASIC0.01□□□□□ -2.41
TOP2AP11388 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.01□□□□□ -2.41
TOP2AP11388 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.01□□□□□ -2.41
TOP2AP11388 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.01□□□□□ -2.41
TOP2AP11388 AL357075.2-201ENST00000614906 189 ntBASIC0.01□□□□□ -2.41
TOP2AP11388 AL391597.1-201ENST00000618707 694 ntBASIC0.01□□□□□ -2.41
TOP2AP11388 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0□□□□□ -2.41
TOP2AP11388 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0□□□□□ -2.41
TOP2AP11388 RPS15AP40-201ENST00000419621 391 ntBASIC0□□□□□ -2.41
TOP2AP11388 FARSBP1-201ENST00000435808 1778 ntBASIC0□□□□□ -2.41
TOP2AP11388 AC108157.1-201ENST00000510511 539 ntBASIC0□□□□□ -2.41
TOP2AP11388 FAM60CP-201ENST00000591086 664 ntBASIC0□□□□□ -2.41
TOP2AP11388 AL022345.2-201ENST00000606307 135 ntBASIC0□□□□□ -2.41
TOP2AP11388 AL627230.5-201ENST00000619807 58 ntBASIC0□□□□□ -2.41
TOP2AP11388 AP003399.1-201ENST00000637534 361 ntBASIC0□□□□□ -2.41
TOP2AP11388 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC-0.01□□□□□ -2.41
TOP2AP11388 OFD1P18Y-201ENST00000420889 959 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 MICF-203ENST00000432679 129 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.01□□□□□ -2.41
TOP2AP11388 AC090666.1-201ENST00000578241 445 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 AC008088.1-201ENST00000580993 280 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 AC073544.2-201ENST00000601155 540 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 Z83818.1-201ENST00000603584 150 ntBASIC-0.01□□□□□ -2.41
TOP2AP11388 AC090625.1-201ENST00000357130 210 ntBASIC-0.02□□□□□ -2.41
TOP2AP11388 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.02□□□□□ -2.41
TOP2AP11388 RNU6-837P-201ENST00000391056 108 ntBASIC-0.02□□□□□ -2.41
TOP2AP11388 MTND1P16-201ENST00000465177 898 ntBASIC-0.02□□□□□ -2.41
TOP2AP11388 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.02□□□□□ -2.41
TOP2AP11388 RNU6-758P-201ENST00000516292 89 ntBASIC-0.02□□□□□ -2.41
TOP2AP11388 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.02□□□□□ -2.41
TOP2AP11388 AC069304.2-201ENST00000605154 435 ntBASIC-0.02□□□□□ -2.41
TOP2AP11388 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC-0.02□□□□□ -2.41
TOP2AP11388 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC-0.02□□□□□ -2.41
TOP2AP11388 U3.9-201ENST00000363823 204 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 RNU2-36P-201ENST00000410361 191 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.03□□□□□ -2.41
TOP2AP11388 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.03□□□□□ -2.41
TOP2AP11388 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC-0.03□□□□□ -2.41
TOP2AP11388 AL356432.3-201ENST00000568952 465 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 AC005832.2-201ENST00000538921 1430 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
TOP2AP11388 MTCO3P12-201ENST00000416718 547 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 RNU7-23P-201ENST00000459465 62 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC-0.03□□□□□ -2.41
TOP2AP11388 CENPF-206ENST00000614578 528 ntTSL 5 BASIC-0.03□□□□□ -2.41
TOP2AP11388 MIR6864-201ENST00000617935 70 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 U1.36-201ENST00000620684 176 ntBASIC-0.03□□□□□ -2.41
TOP2AP11388 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TOP2AP11388 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.04□□□□□ -2.42
TOP2AP11388 MTND2P9-201ENST00000422293 931 ntBASIC-0.04□□□□□ -2.42
TOP2AP11388 AL714022.1-201ENST00000439897 151 ntBASIC-0.04□□□□□ -2.42
TOP2AP11388 RPS26P55-201ENST00000471178 356 ntBASIC-0.04□□□□□ -2.42
TOP2AP11388 AC116337.2-201ENST00000477662 156 ntBASIC-0.04□□□□□ -2.42
TOP2AP11388 AP001330.4-201ENST00000604350 154 ntBASIC-0.04□□□□□ -2.42
TOP2AP11388 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TOP2AP11388 MIR493-201ENST00000385254 89 ntBASIC-0.05□□□□□ -2.42
TOP2AP11388 MTCO2P12-201ENST00000427426 682 ntBASIC-0.05□□□□□ -2.42
TOP2AP11388 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.05□□□□□ -2.42
TOP2AP11388 RPS26P45-201ENST00000471748 340 ntBASIC-0.05□□□□□ -2.42
TOP2AP11388 AC022447.1-201ENST00000515358 464 ntBASIC-0.05□□□□□ -2.42
TOP2AP11388 SCARNA3-201ENST00000517097 143 ntBASIC-0.05□□□□□ -2.42
TOP2AP11388 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.05□□□□□ -2.42
TOP2AP11388 HNRNPDP2-201ENST00000406475 478 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
TOP2AP11388 MTND4LP3-201ENST00000468320 276 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 AC010631.1-201ENST00000474150 156 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 AF213884.2-201ENST00000510417 903 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC-0.06□□□□□ -2.42
TOP2AP11388 AC012414.6-201ENST00000568241 401 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 CLIC4P2-201ENST00000601934 717 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 AC123767.1-202ENST00000620407 817 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.06□□□□□ -2.42
TOP2AP11388 AC027335.2-201ENST00000624030 375 ntBASIC-0.06□□□□□ -2.42
TOP2AP11388 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
TOP2AP11388 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC-0.07□□□□□ -2.42
TOP2AP11388 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.07□□□□□ -2.42
TOP2AP11388 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
TOP2AP11388 CETN4P-201ENST00000432407 469 ntBASIC-0.07□□□□□ -2.42
TOP2AP11388 TPMTP4-201ENST00000450749 678 ntBASIC-0.07□□□□□ -2.42
TOP2AP11388 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.07□□□□□ -2.42
TOP2AP11388 RNU5F-8P-201ENST00000515941 111 ntBASIC-0.07□□□□□ -2.42
TOP2AP11388 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.07□□□□□ -2.42
TOP2AP11388 AP003973.1-201ENST00000604639 691 ntBASIC-0.07□□□□□ -2.42
TOP2AP11388 BX284668.6-201ENST00000606899 438 ntBASIC-0.07□□□□□ -2.42
TOP2AP11388 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC-0.07□□□□□ -2.42
TOP2AP11388 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.07□□□□□ -2.42
TOP2AP11388 RNA5SP391-201ENST00000363456 119 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 RNA5SP368-201ENST00000364298 116 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 MTND4P11-201ENST00000417020 1058 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC-0.08□□□□□ -2.42
TOP2AP11388 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 SNORA31.22-201ENST00000517204 135 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 AC005832.3-201ENST00000537929 631 ntBASIC-0.08□□□□□ -2.42
TOP2AP11388 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.08□□□□□ -2.42
TOP2AP11388 AC010900.2-201ENST00000604508 210 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms