Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SNORD116-5-201ENST00000384462 95 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 RNU6-606P-201ENST00000384721 111 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 RNU2-3P-201ENST00000410144 191 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 CYCSP33-201ENST00000414485 327 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 AL096701.2-201ENST00000416920 238 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB1P09429 AL161788.1-201ENST00000441805 169 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB1P09429 AL118520.1-201ENST00000450770 291 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 AC068781.1-201ENST00000488231 618 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 RPL23AP49-201ENST00000492925 468 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 RNU2-53P-201ENST00000516257 147 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.71□□□□□ -1.82
HMGB1P09429 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.71□□□□□ -1.82
HMGB1P09429 MIR4429-201ENST00000580105 73 ntBASIC3.71□□□□□ -1.82
HMGB1P09429 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.71□□□□□ -1.82
HMGB1P09429 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.71□□□□□ -1.82
HMGB1P09429 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMGB1P09429 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.71□□□□□ -1.82
HMGB1P09429 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB1P09429 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB1P09429 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HMGB1P09429 RNU6-212P-201ENST00000362642 104 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 RNU6-1010P-201ENST00000362757 107 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 RNU6-78P-201ENST00000362897 107 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 Y_RNA.296-201ENST00000364930 108 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 SNORD15B-201ENST00000384714 146 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 MIR186-201ENST00000384988 86 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB1P09429 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB1P09429 RN7SL863P-201ENST00000462370 296 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB1P09429 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.7□□□□□ -1.82
HMGB1P09429 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.7□□□□□ -1.82
HMGB1P09429 AC245166.1-201ENST00000521012 253 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 HPRT1P3-201ENST00000539521 576 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.7□□□□□ -1.82
HMGB1P09429 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.7□□□□□ -1.82
HMGB1P09429 MIR5680-201ENST00000577577 84 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 LRRC37A5P-203ENST00000580181 585 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 AL713866.2-201ENST00000603579 219 ntBASIC3.7□□□□□ -1.82
HMGB1P09429 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HMGB1P09429 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.7□□□□□ -1.82
HMGB1P09429 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HMGB1P09429 RNU6-527P-201ENST00000363425 104 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 Y_RNA.324-201ENST00000365165 102 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 RNU6-487P-201ENST00000365430 104 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 SNORD116-2-201ENST00000384274 95 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 RNU6-393P-201ENST00000384475 107 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 SNORD116-6-201ENST00000384711 96 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 MIR524-201ENST00000385242 87 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 SNORD70.1-201ENST00000391007 85 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AL591416.1-201ENST00000404015 867 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 RNA5SP120-201ENST00000410900 112 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC008267.5-201ENST00000424928 265 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AL669831.1-202ENST00000428504 417 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 YME1L1P1-201ENST00000429435 297 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC073464.1-201ENST00000429823 534 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 GTF2IP13-201ENST00000438487 386 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB1P09429 RN7SL807P-201ENST00000470923 297 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 RPS3AP14-201ENST00000483907 780 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AP001025.1-201ENST00000486139 332 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.69□□□□□ -1.82
HMGB1P09429 MTCO3P9-201ENST00000506989 781 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 MTCO3P7-201ENST00000510008 774 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB1P09429 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.69□□□□□ -1.82
HMGB1P09429 AC084757.4-201ENST00000616350 526 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC012314.7-201ENST00000619693 93 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC136475.10-201ENST00000620253 385 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC010338.1-201ENST00000621823 717 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC018692.3-201ENST00000623929 123 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AC090517.3-201ENST00000625170 141 ntBASIC3.69□□□□□ -1.82
HMGB1P09429 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HMGB1P09429 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.69□□□□□ -1.82
HMGB1P09429 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB1P09429 MTND4P14-201ENST00000435799 1354 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 MIR148B-201ENST00000362252 99 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 MIR670-201ENST00000390142 98 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 SNORA48.7-201ENST00000391302 135 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 OR9R1P-201ENST00000412200 877 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.68□□□□□ -1.82
HMGB1P09429 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB1P09429 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGB1P09429 AC124916.1-201ENST00000444020 547 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 RPL30P12-201ENST00000474666 353 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB1P09429 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HMGB1P09429 AC090897.2-201ENST00000581715 130 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 MIR3611-201ENST00000584484 83 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGB1P09429 NDUFA8P1-201ENST00000605525 367 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 MIR7112-201ENST00000616126 65 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 AC008121.3-201ENST00000618726 433 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 RMST_7.1-201ENST00000621935 268 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 AC008264.2-201ENST00000610193 3731 ntBASIC3.68□□□□□ -1.82
HMGB1P09429 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGB1P09429 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB1P09429 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms