Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RBMX2P4-201ENST00000441256 376 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 CBWD4P-201ENST00000445695 655 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.26□□□□□ -2.05
HOXC4P09017 AC013267.1-201ENST00000458227 267 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 RPL31P41-201ENST00000477967 372 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC4P09017 AC010587.1-201ENST00000505809 469 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC4P09017 RNA5SP291-201ENST00000517222 105 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.26□□□□□ -2.05
HOXC4P09017 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC4P09017 AK6P1-201ENST00000540219 478 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AL133241.1-201ENST00000556832 487 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 TRAV28-201ENST00000557548 323 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 MIR3167-201ENST00000579623 85 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC4P09017 AL391646.1-201ENST00000603860 190 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 RBM11P1-201ENST00000604951 799 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AP000860.1-201ENST00000605250 559 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AC116312.1-201ENST00000606841 314 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXC4P09017 AC107294.1-201ENST00000609524 467 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AC093838.1-201ENST00000613014 469 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AL133173.2-201ENST00000614270 90 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXC4P09017 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC4P09017 AC135776.4-201ENST00000624300 1904 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC4P09017 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
HOXC4P09017 MTND5P6-201ENST00000422338 1798 ntBASIC2.26□□□□□ -2.05
HOXC4P09017 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC009902.3-201ENST00000606235 2172 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 U8.2-201ENST00000363156 134 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 RNU6-1078P-201ENST00000364522 103 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 MIR19A-201ENST00000384878 82 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 U3.20-201ENST00000390909 217 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 MTCO3P40-201ENST00000392516 676 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 RPL23AP32-201ENST00000395315 459 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 RNU4-55P-201ENST00000410731 137 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 PIGFP2-201ENST00000421400 651 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXC4P09017 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC092047.1-201ENST00000424997 240 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC073464.1-201ENST00000429823 534 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC092427.1-202ENST00000430569 476 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 MTCO2P11-201ENST00000431069 680 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 OR4K11P-201ENST00000431829 904 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXC4P09017 PIGFP3-201ENST00000441918 722 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 WASF1P1-201ENST00000447560 1131 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 RPS15AP27-201ENST00000449183 343 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC092989.1-201ENST00000481235 277 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC019235.1-201ENST00000503847 207 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC113155.1-201ENST00000511141 769 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXC4P09017 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC092325.1-201ENST00000566449 554 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC103810.1-201ENST00000579873 453 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 MIR4648-201ENST00000580107 72 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXC4P09017 MIR98-201ENST00000606724 119 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC090970.3-201ENST00000612566 866 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXC4P09017 AC007014.2-201ENST00000615581 479 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 AL603758.1-201ENST00000618654 241 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXC4P09017 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 MIR203B-201ENST00000636080 86 ntBASIC2.25□□□□□ -2.05
HOXC4P09017 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HOXC4P09017 RNU6-181P-201ENST00000363225 107 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 RNU6-1090P-201ENST00000364065 94 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 Y_RNA.256-201ENST00000364594 104 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 RNU4-12P-201ENST00000365233 139 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 Y_RNA.381-201ENST00000365666 102 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXC4P09017 Y_RNA.390-201ENST00000383932 102 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 RNU6-637P-201ENST00000384050 107 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 MIR144-201ENST00000384886 86 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HOXC4P09017 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 AL353193.1-201ENST00000421444 268 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 USP9YP18-201ENST00000425912 695 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC4P09017 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXC4P09017 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXC4P09017 RPS15AP9-201ENST00000439856 381 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 TPT1P14-201ENST00000448018 505 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC132479.1-201ENST00000449160 144 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AL353705.4-201ENST00000449661 238 ntBASIC2.24□□□□□ -2.05
HOXC4P09017 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms