Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.06□□□□□ -1.92
NGFRP08138 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.06□□□□□ -1.92
NGFRP08138 AL355836.1-201ENST00000555951 870 ntBASIC3.06□□□□□ -1.92
NGFRP08138 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.06□□□□□ -1.92
NGFRP08138 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.06□□□□□ -1.92
NGFRP08138 AC104763.2-201ENST00000604179 382 ntBASIC3.06□□□□□ -1.92
NGFRP08138 AC073657.2-201ENST00000605661 303 ntBASIC3.06□□□□□ -1.92
NGFRP08138 SDR42E1P2-201ENST00000614861 481 ntBASIC3.06□□□□□ -1.92
NGFRP08138 MIR8058-201ENST00000615737 89 ntBASIC3.06□□□□□ -1.92
NGFRP08138 AL359547.2-201ENST00000615810 418 ntBASIC3.06□□□□□ -1.92
NGFRP08138 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NGFRP08138 MIR6075-201ENST00000620782 95 ntBASIC3.06□□□□□ -1.92
NGFRP08138 AC022418.1-201ENST00000624118 445 ntBASIC3.06□□□□□ -1.92
NGFRP08138 AC073476.4-201ENST00000628409 72 ntBASIC3.06□□□□□ -1.92
NGFRP08138 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NGFRP08138 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NGFRP08138 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NGFRP08138 AC002546.1-201ENST00000588041 2504 ntBASIC3.05□□□□□ -1.92
NGFRP08138 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.05□□□□□ -1.92
NGFRP08138 RNU6-1303P-201ENST00000364841 107 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RNU6-1040P-201ENST00000383974 107 ntBASIC3.05□□□□□ -1.92
NGFRP08138 Y_RNA.404-201ENST00000383978 102 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RNU6-76P-201ENST00000384060 104 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RNU6-890P-201ENST00000384121 107 ntBASIC3.05□□□□□ -1.92
NGFRP08138 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NGFRP08138 RPS4XP7-201ENST00000406274 780 ntBASIC3.05□□□□□ -1.92
NGFRP08138 Y_RNA.605-201ENST00000410577 105 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RPS12P24-201ENST00000412619 387 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.05□□□□□ -1.92
NGFRP08138 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AC018865.2-201ENST00000423631 129 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AL160275.3-201ENST00000423876 471 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AL591704.1-201ENST00000432574 275 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RPL26P6-201ENST00000440913 438 ntBASIC3.05□□□□□ -1.92
NGFRP08138 IPO7P1-201ENST00000442031 636 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AC116337.1-201ENST00000509680 687 ntBASIC3.05□□□□□ -1.92
NGFRP08138 Y_RNA.670-201ENST00000516255 105 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RNU6-1016P-201ENST00000516689 94 ntBASIC3.05□□□□□ -1.92
NGFRP08138 RNU6-677P-201ENST00000516914 101 ntBASIC3.05□□□□□ -1.92
NGFRP08138 Y_RNA.720-201ENST00000517166 92 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AC100830.2-201ENST00000581636 240 ntBASIC3.05□□□□□ -1.92
NGFRP08138 MIR4276-201ENST00000584832 70 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.05□□□□□ -1.92
NGFRP08138 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.05□□□□□ -1.92
NGFRP08138 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.05□□□□□ -1.92
NGFRP08138 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
NGFRP08138 MIR6128-201ENST00000615528 109 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AC010205.1-201ENST00000616668 449 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AC010378.1-201ENST00000619270 362 ntBASIC3.05□□□□□ -1.92
NGFRP08138 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.05□□□□□ -1.92
NGFRP08138 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.05□□□□□ -1.92
NGFRP08138 U6.105-201ENST00000637379 88 ntBASIC3.05□□□□□ -1.92
NGFRP08138 AC007496.3-201ENST00000624987 3443 ntBASIC3.05□□□□□ -1.92
NGFRP08138 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NGFRP08138 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NGFRP08138 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NGFRP08138 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NGFRP08138 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.04□□□□□ -1.92
NGFRP08138 RNU6-1309P-201ENST00000363305 108 ntBASIC3.04□□□□□ -1.92
NGFRP08138 RNU6-593P-201ENST00000364716 112 ntBASIC3.04□□□□□ -1.92
NGFRP08138 SNORA36C-201ENST00000384289 132 ntBASIC3.04□□□□□ -1.92
NGFRP08138 RNU6-463P-201ENST00000384340 107 ntBASIC3.04□□□□□ -1.92
NGFRP08138 RNU6-95P-201ENST00000384697 107 ntBASIC3.04□□□□□ -1.92
NGFRP08138 MIR490-201ENST00000384865 128 ntBASIC3.04□□□□□ -1.92
NGFRP08138 MIR568-201ENST00000385036 95 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.04□□□□□ -1.92
NGFRP08138 AC079780.1-201ENST00000428259 207 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AC097713.2-201ENST00000430199 356 ntBASIC3.04□□□□□ -1.92
NGFRP08138 RPL23AP69-201ENST00000431134 458 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AL160004.2-201ENST00000432935 350 ntBASIC3.04□□□□□ -1.92
NGFRP08138 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.04□□□□□ -1.92
NGFRP08138 TXNP1-201ENST00000441872 371 ntBASIC3.04□□□□□ -1.92
NGFRP08138 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AL035666.1-201ENST00000446195 348 ntBASIC3.04□□□□□ -1.92
NGFRP08138 CYCSP35-201ENST00000451978 304 ntBASIC3.04□□□□□ -1.92
NGFRP08138 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.04□□□□□ -1.92
NGFRP08138 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.04□□□□□ -1.92
NGFRP08138 AC008155.2-201ENST00000464337 397 ntBASIC3.04□□□□□ -1.92
NGFRP08138 RN7SL330P-201ENST00000469709 307 ntBASIC3.04□□□□□ -1.92
NGFRP08138 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.04□□□□□ -1.92
NGFRP08138 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.04□□□□□ -1.92
NGFRP08138 AL135752.1-201ENST00000479477 471 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AC097473.1-201ENST00000508142 408 ntBASIC3.04□□□□□ -1.92
NGFRP08138 RNU6-976P-201ENST00000516086 111 ntBASIC3.04□□□□□ -1.92
NGFRP08138 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.04□□□□□ -1.92
NGFRP08138 RNU6-988P-201ENST00000519081 107 ntBASIC3.04□□□□□ -1.92
NGFRP08138 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.04□□□□□ -1.92
NGFRP08138 AL121603.1-201ENST00000553815 142 ntBASIC3.04□□□□□ -1.92
NGFRP08138 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.04□□□□□ -1.92
NGFRP08138 MIR4680-201ENST00000580906 66 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AC012119.1-201ENST00000603184 222 ntBASIC3.04□□□□□ -1.92
NGFRP08138 MIR15A-201ENST00000607334 83 ntBASIC3.04□□□□□ -1.92
NGFRP08138 AC009229.3-201ENST00000608056 282 ntBASIC3.04□□□□□ -1.92
NGFRP08138 uc_338.1-201ENST00000612113 180 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms