Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
APOA1P02647 RNU6-413P-201ENST00000384115 107 ntBASIC1.51□□□□□ -2.17
APOA1P02647 SNORA48.7-201ENST00000391302 135 ntBASIC1.51□□□□□ -2.17
APOA1P02647 RN7SKP284-201ENST00000411002 343 ntBASIC1.51□□□□□ -2.17
APOA1P02647 AC016831.2-201ENST00000417179 352 ntBASIC1.51□□□□□ -2.17
APOA1P02647 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.51□□□□□ -2.17
APOA1P02647 HMGB1P18-201ENST00000438801 619 ntBASIC1.51□□□□□ -2.17
APOA1P02647 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.51□□□□□ -2.17
APOA1P02647 SSXP1-201ENST00000453640 473 ntBASIC1.51□□□□□ -2.17
APOA1P02647 MTND1P3-201ENST00000484956 952 ntBASIC1.51□□□□□ -2.17
APOA1P02647 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.51□□□□□ -2.17
APOA1P02647 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.51□□□□□ -2.17
APOA1P02647 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.51□□□□□ -2.17
APOA1P02647 RNA5SP216-201ENST00000516111 123 ntBASIC1.51□□□□□ -2.17
APOA1P02647 SNORA70.24-201ENST00000517233 118 ntBASIC1.51□□□□□ -2.17
APOA1P02647 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.51□□□□□ -2.17
APOA1P02647 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.51□□□□□ -2.17
APOA1P02647 EIF4BP1-201ENST00000554881 351 ntBASIC1.51□□□□□ -2.17
APOA1P02647 AC104581.2-201ENST00000572227 430 ntBASIC1.51□□□□□ -2.17
APOA1P02647 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.51□□□□□ -2.17
APOA1P02647 AL596327.1-201ENST00000603629 213 ntBASIC1.51□□□□□ -2.17
APOA1P02647 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
APOA1P02647 AL589994.2-201ENST00000621124 579 ntBASIC1.51□□□□□ -2.17
APOA1P02647 MIR3529-201ENST00000637713 78 ntBASIC1.51□□□□□ -2.17
APOA1P02647 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
APOA1P02647 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
APOA1P02647 SNORA4.3-201ENST00000365564 137 ntBASIC1.5□□□□□ -2.17
APOA1P02647 Y_RNA.472-201ENST00000384322 102 ntBASIC1.5□□□□□ -2.17
APOA1P02647 Y_RNA.534-201ENST00000384599 112 ntBASIC1.5□□□□□ -2.17
APOA1P02647 RNU6-298P-201ENST00000390888 96 ntBASIC1.5□□□□□ -2.17
APOA1P02647 BTF3L4P2-201ENST00000392798 346 ntBASIC1.5□□□□□ -2.17
APOA1P02647 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 SRIP3-201ENST00000413200 219 ntBASIC1.5□□□□□ -2.17
APOA1P02647 UBE2V1P10-201ENST00000414685 269 ntBASIC1.5□□□□□ -2.17
APOA1P02647 VPS26BP1-201ENST00000417155 755 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 AL117351.1-201ENST00000438864 766 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AC007327.1-201ENST00000447461 264 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AC114781.4-201ENST00000513707 639 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.5□□□□□ -2.17
APOA1P02647 AC022616.8-201ENST00000533569 253 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.5□□□□□ -2.17
APOA1P02647 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.5□□□□□ -2.17
APOA1P02647 AC012065.4-201ENST00000602445 679 ntBASIC1.5□□□□□ -2.17
APOA1P02647 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.5□□□□□ -2.17
APOA1P02647 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.5□□□□□ -2.17
APOA1P02647 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
APOA1P02647 HAUS6P2-201ENST00000433254 2404 ntBASIC1.5□□□□□ -2.17
APOA1P02647 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.49□□□□□ -2.17
APOA1P02647 RNU6-462P-201ENST00000362659 105 ntBASIC1.49□□□□□ -2.17
APOA1P02647 SNORA5B-201ENST00000363786 132 ntBASIC1.49□□□□□ -2.17
APOA1P02647 RNU6-843P-201ENST00000384454 104 ntBASIC1.49□□□□□ -2.17
APOA1P02647 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
APOA1P02647 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
APOA1P02647 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.49□□□□□ -2.17
APOA1P02647 AC069282.1-201ENST00000411911 526 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AC009518.2-201ENST00000418056 731 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL445669.1-201ENST00000426743 755 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL591704.1-201ENST00000432574 275 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL591212.2-201ENST00000433923 257 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.49□□□□□ -2.17
APOA1P02647 AC112198.4-201ENST00000515450 351 ntBASIC1.49□□□□□ -2.17
APOA1P02647 SNORA26.10-201ENST00000516427 141 ntBASIC1.49□□□□□ -2.17
APOA1P02647 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.49□□□□□ -2.17
APOA1P02647 AL157871.3-201ENST00000557231 293 ntBASIC1.49□□□□□ -2.17
APOA1P02647 MIR1273D-201ENST00000577266 86 ntBASIC1.49□□□□□ -2.17
APOA1P02647 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.6-201ENST00000603753 252 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.11-201ENST00000604059 253 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AC008162.1-201ENST00000604718 254 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.1-201ENST00000604752 252 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.5-201ENST00000605253 252 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.12-201ENST00000605291 253 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.8-201ENST00000605353 252 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AL670379.7-201ENST00000605823 252 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AC116312.1-201ENST00000606841 314 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AP003476.1-201ENST00000623984 516 ntBASIC1.49□□□□□ -2.17
APOA1P02647 MTND5P42-201ENST00000637720 498 ntBASIC1.49□□□□□ -2.17
APOA1P02647 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.48□□□□□ -2.17
APOA1P02647 RNU6-655P-201ENST00000362858 107 ntBASIC1.48□□□□□ -2.17
APOA1P02647 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
APOA1P02647 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.48□□□□□ -2.17
APOA1P02647 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.48□□□□□ -2.17
APOA1P02647 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.48□□□□□ -2.17
APOA1P02647 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
APOA1P02647 AC106872.3-201ENST00000495104 446 ntBASIC1.48□□□□□ -2.17
APOA1P02647 AC114801.2-201ENST00000503825 781 ntBASIC1.48□□□□□ -2.17
APOA1P02647 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.48□□□□□ -2.17
APOA1P02647 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.48□□□□□ -2.17
APOA1P02647 RNU6-965P-201ENST00000516721 96 ntBASIC1.48□□□□□ -2.17
APOA1P02647 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.48□□□□□ -2.17
APOA1P02647 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.48□□□□□ -2.17
APOA1P02647 AL354943.1-201ENST00000572103 781 ntBASIC1.48□□□□□ -2.17
APOA1P02647 MTCYBP33-201ENST00000575007 1130 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms