Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.01□□□□□ -1.93
LDLRP01130 SEPT14P2-201ENST00000453405 183 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC006512.1-201ENST00000468816 291 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC126389.1-201ENST00000477436 290 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
LDLRP01130 RPL30P5-201ENST00000494923 336 ntBASIC3.01□□□□□ -1.93
LDLRP01130 SEPT14P4-201ENST00000513445 186 ntBASIC3.01□□□□□ -1.93
LDLRP01130 RNA5SP401-201ENST00000515920 127 ntBASIC3.01□□□□□ -1.93
LDLRP01130 RN7SKP43-201ENST00000516173 320 ntBASIC3.01□□□□□ -1.93
LDLRP01130 RNU6-277P-201ENST00000516272 106 ntBASIC3.01□□□□□ -1.93
LDLRP01130 SNORA40.12-201ENST00000516329 111 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.01□□□□□ -1.93
LDLRP01130 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.01□□□□□ -1.93
LDLRP01130 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.01□□□□□ -1.93
LDLRP01130 FO082796.1-201ENST00000523795 183 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.01□□□□□ -1.93
LDLRP01130 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.01□□□□□ -1.93
LDLRP01130 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.01□□□□□ -1.93
LDLRP01130 MIR3945-201ENST00000581853 98 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.01□□□□□ -1.93
LDLRP01130 VN1R80P-201ENST00000597126 338 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AC104763.2-201ENST00000604179 382 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AL158032.1-201ENST00000605401 106 ntBASIC3.01□□□□□ -1.93
LDLRP01130 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.01□□□□□ -1.93
LDLRP01130 AC130324.3-201ENST00000614165 542 ntBASIC3.01□□□□□ -1.93
LDLRP01130 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.01□□□□□ -1.93
LDLRP01130 AC027309.3-201ENST00000623419 351 ntBASIC3.01□□□□□ -1.93
LDLRP01130 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
LDLRP01130 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.01□□□□□ -1.93
LDLRP01130 AC090740.1-201ENST00000623193 2262 ntBASIC3.01□□□□□ -1.93
LDLRP01130 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LDLRP01130 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
LDLRP01130 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3□□□□□ -1.93
LDLRP01130 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LDLRP01130 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3□□□□□ -1.93
LDLRP01130 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3□□□□□ -1.93
LDLRP01130 Y_RNA.162-201ENST00000363683 102 ntBASIC3□□□□□ -1.93
LDLRP01130 SNORA62.1-201ENST00000364287 154 ntBASIC3□□□□□ -1.93
LDLRP01130 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3□□□□□ -1.93
LDLRP01130 AC005534.2-201ENST00000431047 433 ntBASIC3□□□□□ -1.93
LDLRP01130 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3□□□□□ -1.93
LDLRP01130 AL512844.2-201ENST00000433990 593 ntBASIC3□□□□□ -1.93
LDLRP01130 AC233279.1-201ENST00000455300 423 ntBASIC3□□□□□ -1.93
LDLRP01130 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3□□□□□ -1.93
LDLRP01130 RNU6-261P-201ENST00000459506 102 ntBASIC3□□□□□ -1.93
LDLRP01130 RPL37P6-201ENST00000460682 294 ntBASIC3□□□□□ -1.93
LDLRP01130 RPS20P22-201ENST00000473700 357 ntBASIC3□□□□□ -1.93
LDLRP01130 MTND5P5-201ENST00000503764 376 ntBASIC3□□□□□ -1.93
LDLRP01130 AC108078.2-201ENST00000510750 236 ntBASIC3□□□□□ -1.93
LDLRP01130 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
LDLRP01130 SNORA31.3-201ENST00000516029 96 ntBASIC3□□□□□ -1.93
LDLRP01130 Y_RNA.689-201ENST00000516589 107 ntBASIC3□□□□□ -1.93
LDLRP01130 RNA5SP290-201ENST00000517133 127 ntBASIC3□□□□□ -1.93
LDLRP01130 RNA5SP291-201ENST00000517222 105 ntBASIC3□□□□□ -1.93
LDLRP01130 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
LDLRP01130 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3□□□□□ -1.93
LDLRP01130 AC105029.1-201ENST00000520250 669 ntBASIC3□□□□□ -1.93
LDLRP01130 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
LDLRP01130 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
LDLRP01130 AP003072.2-201ENST00000527756 676 ntBASIC3□□□□□ -1.93
LDLRP01130 AC023050.3-201ENST00000541142 333 ntBASIC3□□□□□ -1.93
LDLRP01130 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3□□□□□ -1.93
LDLRP01130 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3□□□□□ -1.93
LDLRP01130 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3□□□□□ -1.93
LDLRP01130 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3□□□□□ -1.93
LDLRP01130 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3□□□□□ -1.93
LDLRP01130 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3□□□□□ -1.93
LDLRP01130 AC024619.4-201ENST00000580924 316 ntBASIC3□□□□□ -1.93
LDLRP01130 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3□□□□□ -1.93
LDLRP01130 AC034102.8-201ENST00000615146 484 ntBASIC3□□□□□ -1.93
LDLRP01130 AL160413.1-201ENST00000622780 310 ntBASIC3□□□□□ -1.93
LDLRP01130 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
LDLRP01130 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LDLRP01130 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LDLRP01130 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
LDLRP01130 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
LDLRP01130 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LDLRP01130 RNU6-1120P-201ENST00000362988 108 ntBASIC2.99□□□□□ -1.93
LDLRP01130 RNU6-1167P-201ENST00000363227 94 ntBASIC2.99□□□□□ -1.93
LDLRP01130 RNU6-179P-201ENST00000363350 107 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.138-201ENST00000363462 102 ntBASIC2.99□□□□□ -1.93
LDLRP01130 Y_RNA.157-201ENST00000363638 102 ntBASIC2.99□□□□□ -1.93
LDLRP01130 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.99□□□□□ -1.93
LDLRP01130 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LDLRP01130 RNU6-741P-201ENST00000383889 107 ntBASIC2.99□□□□□ -1.93
LDLRP01130 RPS4XP3-201ENST00000398541 413 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AL139095.1-201ENST00000404326 391 ntBASIC2.99□□□□□ -1.93
LDLRP01130 MIR1302-11-201ENST00000408051 138 ntBASIC2.99□□□□□ -1.93
LDLRP01130 MIR1302-9-201ENST00000408365 138 ntBASIC2.99□□□□□ -1.93
LDLRP01130 MIR1302-10-201ENST00000408734 138 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AF228730.4-201ENST00000421457 183 ntBASIC2.99□□□□□ -1.93
LDLRP01130 RPL23AP69-201ENST00000431134 458 ntBASIC2.99□□□□□ -1.93
LDLRP01130 MRPL50P4-201ENST00000446432 475 ntBASIC2.99□□□□□ -1.93
LDLRP01130 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.99□□□□□ -1.93
LDLRP01130 CACYBPP2-201ENST00000453625 678 ntBASIC2.99□□□□□ -1.93
LDLRP01130 RNU6-953P-201ENST00000459154 107 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AL135752.1-201ENST00000479477 471 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AL160314.1-201ENST00000490836 438 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC006445.2-201ENST00000510061 472 ntBASIC2.99□□□□□ -1.93
LDLRP01130 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms