Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN1O95832 Y_RNA.390-201ENST00000383932 102 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 RNU6-1197P-201ENST00000391183 107 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 RNU6-1068P-201ENST00000410958 103 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 OR9R1P-201ENST00000412200 877 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN1O95832 BMS1P22-201ENST00000414726 313 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AC245054.2-201ENST00000415639 319 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 RPL30P16-201ENST00000419341 429 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.65□□□□□ -1.99
CLDN1O95832 RPL36AP53-201ENST00000432891 316 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 MTATP6P23-201ENST00000440153 476 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN1O95832 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.65□□□□□ -1.99
CLDN1O95832 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN1O95832 AL135752.1-201ENST00000479477 471 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AL160314.1-201ENST00000490836 438 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.65□□□□□ -1.99
CLDN1O95832 MTCO3P9-201ENST00000506989 781 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AC104806.1-201ENST00000508720 308 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN1O95832 RNA5SP401-201ENST00000515920 127 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 Y_RNA.689-201ENST00000516589 107 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 ADI1P3-201ENST00000549509 470 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.65□□□□□ -1.99
CLDN1O95832 AC006111.3-201ENST00000622137 383 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AC024614.3-201ENST00000637860 256 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 AC099654.14-201ENST00000638599 341 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 GABRG2-229ENST00000641017 3628 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CLDN1O95832 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLDN1O95832 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
CLDN1O95832 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.99
CLDN1O95832 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN1O95832 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CLDN1O95832 UBE2L2-201ENST00000254302 429 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN1O95832 U3.6-201ENST00000363622 211 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 RNU4-20P-201ENST00000365601 151 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CLDN1O95832 AC092047.1-201ENST00000424997 240 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC087499.2-201ENST00000432861 149 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 HMGB1P18-201ENST00000438801 619 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC104058.1-201ENST00000448028 297 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC128713.1-201ENST00000471495 306 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC117440.1-201ENST00000474107 571 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 EIF4EP3-201ENST00000498782 656 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 MTCYBP18-201ENST00000501056 747 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 SUMO2P6-201ENST00000505273 288 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 RNU6-914P-201ENST00000516749 109 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.64□□□□□ -1.99
CLDN1O95832 CASP1P1-201ENST00000526345 212 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC079600.2-201ENST00000550076 130 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN1O95832 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN1O95832 AC009570.1-201ENST00000609599 745 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AC002076.2-201ENST00000617362 122 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 MIR3662-201ENST00000637030 95 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 AL049641.1-201ENST00000441055 1948 ntBASIC2.64□□□□□ -1.99
CLDN1O95832 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.64□□□□□ -1.99
CLDN1O95832 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLDN1O95832 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN1O95832 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CLDN1O95832 RNU6-38P-201ENST00000384085 107 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CLDN1O95832 RPL21P3-201ENST00000395517 478 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 RN7SKP123-201ENST00000410732 291 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 AL160275.3-201ENST00000423876 471 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 SNRPEP4-201ENST00000435815 279 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.63□□□□□ -1.99
CLDN1O95832 AL513328.1-201ENST00000446460 224 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 UQCRHP3-201ENST00000451503 251 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 RNU6-333P-201ENST00000459117 107 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC146507.2-201ENST00000460608 476 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 HMGN2P26-201ENST00000463169 339 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC091885.1-201ENST00000506658 268 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 RNU6-1282P-201ENST00000516735 96 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 AP003122.3-201ENST00000526316 255 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC084851.1-201ENST00000529105 249 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AL137161.1-201ENST00000532231 390 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 MTCO3P23-201ENST00000561363 289 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.63□□□□□ -1.99
CLDN1O95832 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.63□□□□□ -1.99
CLDN1O95832 MIR15A-201ENST00000607334 83 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
CLDN1O95832 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CLDN1O95832 AC006504.8-201ENST00000621046 635 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 HSPA8P4-201ENST00000511877 1920 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 AC108206.1-201ENST00000570186 4159 ntBASIC2.63□□□□□ -1.99
CLDN1O95832 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms