Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.8□□□□□ -1.96
GGPS1O95749 AL445687.1-201ENST00000439946 251 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 USP9YP29-201ENST00000445112 563 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 RPL23AP20-201ENST00000447965 421 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 BTF3P15-201ENST00000455606 336 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 AC022493.1-201ENST00000492984 337 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 EIF4EP3-201ENST00000498782 656 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.8□□□□□ -1.96
GGPS1O95749 FAM92A1P2-202ENST00000504766 877 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 ARL2BPP4-201ENST00000506854 471 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 TBCAP3-201ENST00000512475 312 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 AC008549.1-201ENST00000512900 643 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 RNA5SP24-201ENST00000516478 95 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 RPPH1-2P-201ENST00000516688 293 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 SNORA31.18-201ENST00000517043 134 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 BTF3P12-201ENST00000519620 469 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.8□□□□□ -1.96
GGPS1O95749 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.8□□□□□ -1.96
GGPS1O95749 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.8□□□□□ -1.96
GGPS1O95749 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.8□□□□□ -1.96
GGPS1O95749 AP002770.2-201ENST00000543613 532 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 MIR3117-201ENST00000584034 78 ntBASIC2.8□□□□□ -1.96
GGPS1O95749 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.8□□□□□ -1.96
GGPS1O95749 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GGPS1O95749 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
GGPS1O95749 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
GGPS1O95749 MTND5P17-201ENST00000418405 1603 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.79□□□□□ -1.96
GGPS1O95749 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.79□□□□□ -1.96
GGPS1O95749 MIR412-201ENST00000362142 91 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 BX295541.1-201ENST00000417774 250 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.79□□□□□ -1.96
GGPS1O95749 MICF-203ENST00000432679 129 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.79□□□□□ -1.96
GGPS1O95749 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.79□□□□□ -1.96
GGPS1O95749 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.79□□□□□ -1.96
GGPS1O95749 AL583843.1-201ENST00000456070 346 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AL121769.1-201ENST00000469473 401 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 RPL23AP45-201ENST00000476406 468 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
GGPS1O95749 RBBP4P6-201ENST00000508098 202 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.79□□□□□ -1.96
GGPS1O95749 RNU6-685P-201ENST00000517088 95 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.79□□□□□ -1.96
GGPS1O95749 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.79□□□□□ -1.96
GGPS1O95749 MIR548AC-201ENST00000585049 88 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AL356575.1-201ENST00000603008 283 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AL356280.1-201ENST00000603614 379 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AL645944.1-201ENST00000603857 493 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 uc_338.14-201ENST00000613162 166 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 AC080128.1-201ENST00000474389 1917 ntBASIC2.79□□□□□ -1.96
GGPS1O95749 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
GGPS1O95749 CKAP2P1-201ENST00000555477 2049 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.78□□□□□ -1.96
GGPS1O95749 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
GGPS1O95749 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GGPS1O95749 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GGPS1O95749 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GGPS1O95749 SNORA25.6-201ENST00000364121 118 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 RNU6-1280P-201ENST00000365211 107 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 RNU6-74P-201ENST00000384235 107 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 RNU6-748P-201ENST00000384648 107 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 MIR147B-201ENST00000390185 80 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AL359511.1-201ENST00000402970 211 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 MIR1302-8-201ENST00000408342 128 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.78□□□□□ -1.96
GGPS1O95749 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.78□□□□□ -1.96
GGPS1O95749 PIGFP2-201ENST00000421400 651 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 MTCYBP5-201ENST00000423752 1135 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AC133104.1-201ENST00000429100 218 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.78□□□□□ -1.96
GGPS1O95749 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.78□□□□□ -1.96
GGPS1O95749 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.78□□□□□ -1.96
GGPS1O95749 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.78□□□□□ -1.96
GGPS1O95749 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.78□□□□□ -1.96
GGPS1O95749 AC079448.1-201ENST00000449377 373 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 RNU6-956P-201ENST00000458868 103 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.78□□□□□ -1.96
GGPS1O95749 RN7SL636P-201ENST00000497504 294 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AC116655.1-201ENST00000508324 901 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AC112206.3-201ENST00000514578 389 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 RANP3-201ENST00000530970 276 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 OR5BN1P-201ENST00000532955 829 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AP000873.5-201ENST00000533906 236 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
GGPS1O95749 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.78□□□□□ -1.96
GGPS1O95749 MIR3913-1-201ENST00000577744 102 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.78□□□□□ -1.96
GGPS1O95749 DEFB131E-202ENST00000602581 683 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AC008121.1-201ENST00000603244 268 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 AP001486.3-201ENST00000615334 372 ntBASIC2.78□□□□□ -1.96
GGPS1O95749 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
GGPS1O95749 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GGPS1O95749 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GGPS1O95749 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
GGPS1O95749 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
GGPS1O95749 MTND5P30-201ENST00000452896 1731 ntBASIC2.77□□□□□ -1.97
GGPS1O95749 MIR6073-201ENST00000352083 89 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms