Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.49□□□□□ -2.33
POLR1AO95602 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.49□□□□□ -2.33
POLR1AO95602 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.49□□□□□ -2.33
POLR1AO95602 AC007349.4-201ENST00000608114 532 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 MIR6130-201ENST00000619419 109 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 MIR5739-201ENST00000619803 80 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
POLR1AO95602 RNU6-1083P-201ENST00000384022 107 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 AC097463.2-201ENST00000421074 142 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 Z99497.1-201ENST00000421282 135 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
POLR1AO95602 MRPS17P3-201ENST00000465453 385 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 RPL30P7-201ENST00000479312 323 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.48□□□□□ -2.33
POLR1AO95602 AP000403.1-201ENST00000603349 851 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 AL355472.4-201ENST00000610233 626 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 AC104763.3-201ENST00000613765 618 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 AC087588.2-201ENST00000617667 426 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 U1.36-201ENST00000620684 176 ntBASIC0.48□□□□□ -2.33
POLR1AO95602 RNU6-105P-201ENST00000363909 104 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 SNORD1A-201ENST00000364968 72 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 RNU6-1226P-201ENST00000384317 107 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 RNU6-750P-201ENST00000390946 107 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 RPL7P29-201ENST00000437151 728 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 RPS20P24-201ENST00000457473 361 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 HMGB1P36-201ENST00000487709 576 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.47□□□□□ -2.33
POLR1AO95602 AC111000.5-201ENST00000506559 1178 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.47□□□□□ -2.33
POLR1AO95602 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.47□□□□□ -2.33
POLR1AO95602 AC010615.3-201ENST00000597319 394 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AL137246.1-201ENST00000607072 977 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AL391597.1-201ENST00000618707 694 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 EIF4EP2-201ENST00000422816 654 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AL160275.3-201ENST00000423876 471 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AL606489.2-201ENST00000433886 234 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC023512.1-201ENST00000444513 499 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 TRBVB-201ENST00000477100 408 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 ACA64.5-201ENST00000516207 127 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC136932.1-201ENST00000574771 208 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC055876.5-201ENST00000605667 259 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.47□□□□□ -2.33
POLR1AO95602 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC073308.1-201ENST00000623696 305 ntBASIC0.47□□□□□ -2.33
POLR1AO95602 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
POLR1AO95602 RNU6-989P-201ENST00000362756 107 ntBASIC0.46□□□□□ -2.34
POLR1AO95602 MIR1265-201ENST00000408444 86 ntBASIC0.46□□□□□ -2.34
POLR1AO95602 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.46□□□□□ -2.34
POLR1AO95602 SNORD116-28-201ENST00000516123 91 ntBASIC0.46□□□□□ -2.34
POLR1AO95602 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.46□□□□□ -2.34
POLR1AO95602 AL391261.3-201ENST00000557194 520 ntBASIC0.46□□□□□ -2.34
POLR1AO95602 MTND4LP5-201ENST00000605152 292 ntBASIC0.46□□□□□ -2.34
POLR1AO95602 Z99571.1-201ENST00000636677 394 ntBASIC0.46□□□□□ -2.34
POLR1AO95602 ZNF680P1-201ENST00000436625 1469 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 RNU1-124P-201ENST00000363861 145 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 RNU6-968P-201ENST00000384076 107 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 MIR518D-201ENST00000385014 87 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 MIR325-201ENST00000385260 98 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 TAF9BP2-201ENST00000400856 499 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 MTATP6P31-201ENST00000406985 692 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.45□□□□□ -2.34
POLR1AO95602 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.45□□□□□ -2.34
POLR1AO95602 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.45□□□□□ -2.34
POLR1AO95602 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.45□□□□□ -2.34
POLR1AO95602 AC121161.1-201ENST00000510606 652 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 AC136628.3-201ENST00000521868 290 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 AP003122.4-201ENST00000530980 758 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
POLR1AO95602 AC019288.1-201ENST00000557918 224 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.45□□□□□ -2.34
POLR1AO95602 AL138963.2-201ENST00000605137 226 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 AP000238.1-201ENST00000608759 426 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 uc_338.22-201ENST00000622722 187 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 MTND5P30-201ENST00000452896 1731 ntBASIC0.45□□□□□ -2.34
POLR1AO95602 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
POLR1AO95602 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
POLR1AO95602 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
POLR1AO95602 RNU6-339P-201ENST00000384310 107 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 RNU11-3P-201ENST00000391111 133 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 AL031577.2-201ENST00000404133 280 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 AC006461.1-201ENST00000412637 326 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR1AO95602 UBE2V1P4-201ENST00000425374 344 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 NDUFA5P10-201ENST00000432147 357 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR1AO95602 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR1AO95602 SCARNA16.2-201ENST00000516520 172 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR1AO95602 AL359212.1-201ENST00000556608 614 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 MIR8065-201ENST00000620577 100 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 RNU6-26P-201ENST00000383985 107 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 Y_RNA.476-201ENST00000384347 108 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
POLR1AO95602 RPL21P24-201ENST00000413752 448 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.44□□□□□ -2.34
POLR1AO95602 RAP1BP2-201ENST00000478270 544 ntBASIC0.44□□□□□ -2.34
POLR1AO95602 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.44□□□□□ -2.34
POLR1AO95602 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.44□□□□□ -2.34
POLR1AO95602 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms