Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ERLEC1P1-201ENST00000433806 578 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-2O95096 AL121601.2-201ENST00000438019 707 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 AL161651.1-201ENST00000440882 223 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 NIPA2P5-201ENST00000452282 464 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 RPS29P12-201ENST00000460178 152 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-2O95096 Y_RNA.654-201ENST00000497848 106 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NKX2-2O95096 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-2O95096 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-2O95096 AC113155.1-201ENST00000511141 769 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-2O95096 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 SNORA25.17-201ENST00000517184 124 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 AL121821.2-201ENST00000556081 394 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 NRBF2P5-201ENST00000603087 788 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 RNU6-89P-201ENST00000606519 100 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 AC103705.1-201ENST00000619013 241 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-2O95096 AL079305.1-201ENST00000623159 3008 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.87□□□□□ -1.95
NKX2-2O95096 MIR148B-201ENST00000362252 99 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 RNU6-522P-201ENST00000364497 107 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 Y_RNA.324-201ENST00000365165 102 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 RNU1-100P-201ENST00000365255 165 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 RAP1BP3-201ENST00000407180 549 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 RNA5SP118-201ENST00000410385 109 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 POLHP1-201ENST00000411806 470 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 RPLP0P7-201ENST00000416050 667 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-2O95096 RNU6-1208P-201ENST00000459588 107 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-2O95096 PHBP14-201ENST00000512887 367 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 RNU6-189P-201ENST00000516120 101 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 AC078814.3-201ENST00000553036 491 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-2O95096 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.86□□□□□ -1.95
NKX2-2O95096 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-2O95096 AL391813.1-201ENST00000603098 260 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.86□□□□□ -1.95
NKX2-2O95096 Z82243.1-201ENST00000609432 473 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 AC068944.2-201ENST00000610373 403 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-2O95096 AC002553.4-201ENST00000616896 331 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 SCARNA4-202ENST00000625402 129 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-2O95096 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.86□□□□□ -1.95
NKX2-2O95096 ZNF519P1-201ENST00000449011 1626 ntBASIC2.86□□□□□ -1.95
NKX2-2O95096 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NKX2-2O95096 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-2O95096 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-2O95096 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-2O95096 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-2O95096 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-2O95096 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.85□□□□□ -1.95
NKX2-2O95096 Y_RNA.167-201ENST00000363735 109 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 RNU6-266P-201ENST00000364225 107 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 U3.12-201ENST00000364498 214 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 Y_RNA.248-201ENST00000364501 109 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 Y_RNA.378-201ENST00000365652 113 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 RNA5SP219-201ENST00000390940 113 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 MIR1289-1-201ENST00000408836 144 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 RNU6-373P-201ENST00000411247 98 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AL358075.3-201ENST00000426289 226 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 TRIAP1P1-201ENST00000427062 225 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-2O95096 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC092001.1-201ENST00000453012 261 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 HMGN2P26-201ENST00000463169 339 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 RN7SL20P-201ENST00000488827 297 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC116655.1-201ENST00000508324 901 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 HIGD1AP13-201ENST00000509878 289 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-2O95096 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-2O95096 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.85□□□□□ -1.95
NKX2-2O95096 AC007151.1-201ENST00000572774 483 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC005261.5-201ENST00000596280 355 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC008739.2-201ENST00000597006 317 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 VN1R80P-201ENST00000597126 338 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AL355877.2-201ENST00000603670 358 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AP000907.4-201ENST00000604143 237 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC091152.3-201ENST00000604227 325 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 YPEL5P2-201ENST00000605553 359 ntBASIC2.85□□□□□ -1.95
NKX2-2O95096 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms