Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SEMA3DO95025 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AC103710.2-201ENST00000609912 942 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 uc_338.12-201ENST00000616344 181 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AC244517.12-201ENST00000623581 663 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.84□□□□□ -2.11
SEMA3DO95025 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.83□□□□□ -2.12
SEMA3DO95025 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
SEMA3DO95025 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SEMA3DO95025 RNU6-511P-201ENST00000363496 107 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 RNU1-148P-201ENST00000384472 162 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AL356432.1-201ENST00000405809 419 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 RNU2-62P-201ENST00000410868 191 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.83□□□□□ -2.12
SEMA3DO95025 AL353777.1-201ENST00000425552 326 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 PTGES3P4-201ENST00000426243 356 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AL451074.3-201ENST00000437709 472 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.83□□□□□ -2.12
SEMA3DO95025 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.83□□□□□ -2.12
SEMA3DO95025 AC118469.1-201ENST00000442943 488 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 Z73417.1-201ENST00000447373 778 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.83□□□□□ -2.12
SEMA3DO95025 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SEMA3DO95025 RNU6-143P-201ENST00000516942 93 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 RNU6-201P-201ENST00000517100 61 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SEMA3DO95025 AC022616.6-201ENST00000520479 119 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AC084851.1-201ENST00000529105 249 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 ZNF519P3-201ENST00000557158 1032 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.83□□□□□ -2.12
SEMA3DO95025 MIR3118-1-201ENST00000581787 76 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.83□□□□□ -2.12
SEMA3DO95025 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
SEMA3DO95025 AC104763.2-201ENST00000604179 382 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AL050303.3-201ENST00000613704 284 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AC010678.1-201ENST00000614118 713 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AC130324.3-201ENST00000614165 542 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 U4atac.1-201ENST00000618345 95 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AC091953.2-201ENST00000623979 160 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AL512643.1-201ENST00000635735 524 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 AC007671.2-201ENST00000637344 619 ntBASIC1.83□□□□□ -2.12
SEMA3DO95025 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
SEMA3DO95025 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SEMA3DO95025 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
SEMA3DO95025 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.82□□□□□ -2.12
SEMA3DO95025 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SEMA3DO95025 RNU6-1214P-201ENST00000363650 109 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 SNORA4.3-201ENST00000365564 137 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 RNU5E-6P-201ENST00000365574 115 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SEMA3DO95025 SNORA70B-201ENST00000384210 135 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 RNU6-817P-201ENST00000391083 104 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC092809.3-201ENST00000415453 231 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 RPS24P7-201ENST00000416921 246 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 RPL22P18-201ENST00000417197 377 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC098592.1-201ENST00000419352 333 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 RPS27AP14-201ENST00000422868 454 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 BX276092.3-201ENST00000424182 230 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.82□□□□□ -2.12
SEMA3DO95025 RPL22P17-201ENST00000438729 315 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL353689.1-201ENST00000438895 199 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 BRK1P2-201ENST00000442875 223 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL606517.1-201ENST00000446914 387 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
SEMA3DO95025 SNORD11.1-201ENST00000459482 85 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC107032.1-201ENST00000485945 480 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC011005.2-201ENST00000487324 359 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 MTAPP1-201ENST00000489154 819 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 RPL38P4-201ENST00000502376 214 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AF131216.2-201ENST00000512316 564 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 RNU6-572P-201ENST00000516724 80 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 MTND4LP18-201ENST00000526864 291 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 ELOCP32-201ENST00000548625 324 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.82□□□□□ -2.12
SEMA3DO95025 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 MIR3122-201ENST00000577243 73 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.6-201ENST00000603753 252 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.11-201ENST00000604059 253 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC008162.1-201ENST00000604718 254 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.1-201ENST00000604752 252 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.5-201ENST00000605253 252 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.12-201ENST00000605291 253 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.8-201ENST00000605353 252 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AL670379.7-201ENST00000605823 252 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.82□□□□□ -2.12
SEMA3DO95025 AC069294.1-201ENST00000608397 350 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 MTND5P42-201ENST00000637720 498 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 AC092104.1-201ENST00000497346 1441 ntBASIC1.82□□□□□ -2.12
SEMA3DO95025 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.81□□□□□ -2.12
SEMA3DO95025 AL359854.1-201ENST00000614203 1594 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms