Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC008739.3-201ENST00000603262 127 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.77□□□□□ -1.81
CDKL5O76039 MIR92B-201ENST00000607575 96 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AL353748.2-201ENST00000622148 471 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AC091903.1-201ENST00000624322 454 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AL669831.3-213ENST00000636676 183 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CDKL5O76039 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL5O76039 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDKL5O76039 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CDKL5O76039 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CDKL5O76039 Y_RNA.28-201ENST00000362554 111 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 RNU6-562P-201ENST00000362731 107 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 RNU6-805P-201ENST00000365643 106 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL5O76039 RNU6-434P-201ENST00000384376 107 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 RNU6-882P-201ENST00000391025 103 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 Y_RNA.646-201ENST00000410980 101 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 RPL32P35-201ENST00000415214 394 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL5O76039 AL590632.1-201ENST00000424289 371 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 RPL7P37-201ENST00000425095 738 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL5O76039 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL5O76039 RPS27P29-201ENST00000463110 252 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.76□□□□□ -1.81
CDKL5O76039 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL5O76039 AC021146.2-201ENST00000504736 556 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.76□□□□□ -1.81
CDKL5O76039 AC079140.5-201ENST00000507882 310 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 RNA5SP217-201ENST00000515959 91 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 SCARNA20.6-201ENST00000517251 106 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL5O76039 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.76□□□□□ -1.81
CDKL5O76039 AC005951.2-201ENST00000576282 495 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.76□□□□□ -1.81
CDKL5O76039 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.76□□□□□ -1.81
CDKL5O76039 XIAPP1-201ENST00000603162 600 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AC104763.2-201ENST00000604179 382 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AP000654.2-201ENST00000605633 586 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AL121655.1-201ENST00000605811 308 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.76□□□□□ -1.81
CDKL5O76039 AL591516.1-201ENST00000611326 274 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 SDR42E1P2-201ENST00000614861 481 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 AL359547.2-201ENST00000615810 418 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 U6.105-201ENST00000637379 88 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL5O76039 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL5O76039 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDKL5O76039 KPNA2P1-201ENST00000458289 1591 ntBASIC3.76□□□□□ -1.81
CDKL5O76039 MTND5P16-201ENST00000460269 1703 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
CDKL5O76039 MTND4P1-201ENST00000457501 1466 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 Y_RNA.112-201ENST00000363250 102 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 SNORD56.3-201ENST00000363507 71 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 RNU6-288P-201ENST00000363690 104 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDKL5O76039 RNU6-356P-201ENST00000384140 107 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 MIR183-201ENST00000384958 110 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 RNU6-837P-201ENST00000391056 108 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 RPS4XP7-201ENST00000406274 780 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.75□□□□□ -1.81
CDKL5O76039 AC097713.2-201ENST00000430199 356 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.75□□□□□ -1.81
CDKL5O76039 SNAP23P1-201ENST00000433229 246 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.75□□□□□ -1.81
CDKL5O76039 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.75□□□□□ -1.81
CDKL5O76039 RNU6-1332P-201ENST00000516666 104 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 RNU6-677P-201ENST00000516914 101 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 RNU6-1137P-201ENST00000517073 99 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 MIR3941-201ENST00000582572 103 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.75□□□□□ -1.81
CDKL5O76039 AC174048.1-201ENST00000603389 144 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 AC019176.2-201ENST00000611579 315 ntBASIC3.75□□□□□ -1.81
CDKL5O76039 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CDKL5O76039 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDKL5O76039 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.74□□□□□ -1.81
CDKL5O76039 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDKL5O76039 Y_RNA.148-201ENST00000363557 117 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 Y_RNA.473-201ENST00000384333 102 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 AL356057.3-201ENST00000402607 340 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.74□□□□□ -1.81
CDKL5O76039 ATG3P1-201ENST00000419507 911 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.74□□□□□ -1.81
CDKL5O76039 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CDKL5O76039 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDKL5O76039 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.74□□□□□ -1.81
CDKL5O76039 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDKL5O76039 RNU6-1016P-201ENST00000516689 94 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 RN7SKP258-201ENST00000517151 304 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 RNU6-840P-201ENST00000517275 65 ntBASIC3.74□□□□□ -1.81
CDKL5O76039 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.74□□□□□ -1.81
CDKL5O76039 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.74□□□□□ -1.81
CDKL5O76039 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.74□□□□□ -1.81
CDKL5O76039 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.74□□□□□ -1.81
CDKL5O76039 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.74□□□□□ -1.81
CDKL5O76039 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.74□□□□□ -1.81
CDKL5O76039 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.74□□□□□ -1.81
CDKL5O76039 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms