Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC006504.8-201ENST00000621046 635 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 MIR6873-201ENST00000622788 63 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CACNA1FO60840 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.84□□□□□ -1.96
CACNA1FO60840 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.84□□□□□ -1.96
CACNA1FO60840 RNU6-50P-201ENST00000362356 103 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 SNORA32.2-201ENST00000384049 122 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU6-1158P-201ENST00000391167 107 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AL356776.1-201ENST00000406574 447 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 MTCO3P46-201ENST00000425787 232 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 HIGD1AP2-201ENST00000446367 280 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.83□□□□□ -1.96
CACNA1FO60840 PMCHL2-203ENST00000457791 237 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 YWHAEP4-201ENST00000505390 198 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.83□□□□□ -1.96
CACNA1FO60840 RNA5SP401-201ENST00000515920 127 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU6-1153P-201ENST00000516760 105 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AL356575.1-201ENST00000603008 283 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC025588.3-201ENST00000604182 274 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC013553.2-201ENST00000604244 589 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AL596245.1-201ENST00000618994 362 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC112204.3-201ENST00000623822 332 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AP003122.6-201ENST00000623831 495 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AC099654.10-201ENST00000640395 161 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 MTCO1P9-201ENST00000505577 1534 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 MTND5P6-201ENST00000422338 1798 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU6-451P-201ENST00000362921 107 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU6-1243P-201ENST00000364028 107 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU6-359P-201ENST00000365466 108 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CACNA1FO60840 SNORA69-201ENST00000383895 132 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU6-1029P-201ENST00000384109 107 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CACNA1FO60840 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CACNA1FO60840 DDX3P2-201ENST00000446138 111 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.83□□□□□ -1.96
CACNA1FO60840 snoU13.3-201ENST00000459441 104 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC083798.1-201ENST00000472671 131 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC018710.1-201ENST00000506509 158 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 RNU2-46P-201ENST00000517038 113 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CACNA1FO60840 AC023050.3-201ENST00000541142 333 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AC060780.3-201ENST00000589464 80 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.83□□□□□ -1.96
CACNA1FO60840 AC005498.1-201ENST00000592125 465 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC021646.1-201ENST00000605469 484 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AL590099.1-201ENST00000615276 138 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CACNA1FO60840 uc_338.11-201ENST00000619132 160 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 TPTEP1-208ENST00000636884 213 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 AC009487.2-201ENST00000420969 6821 ntBASIC2.83□□□□□ -1.96
CACNA1FO60840 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CACNA1FO60840 RNU4-76P-201ENST00000364509 141 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 RNU6-282P-201ENST00000365357 103 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.82□□□□□ -1.96
CACNA1FO60840 RNU6-432P-201ENST00000384196 109 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 SNORD51-201ENST00000384320 80 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 snosnR66.1-201ENST00000391095 99 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.82□□□□□ -1.96
CACNA1FO60840 UBE2V1P13-201ENST00000436983 439 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 AL353705.4-201ENST00000449661 238 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.82□□□□□ -1.96
CACNA1FO60840 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.82□□□□□ -1.96
CACNA1FO60840 Y_RNA.638-201ENST00000459374 113 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.82□□□□□ -1.96
CACNA1FO60840 AC060766.3-201ENST00000591442 263 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 AC068790.3-201ENST00000602988 553 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 AC091953.2-201ENST00000623979 160 ntBASIC2.82□□□□□ -1.96
CACNA1FO60840 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.82□□□□□ -1.96
CACNA1FO60840 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.82□□□□□ -1.96
CACNA1FO60840 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
CACNA1FO60840 RNU6-1120P-201ENST00000362988 108 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 RNU1-73P-201ENST00000383971 164 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.81□□□□□ -1.96
CACNA1FO60840 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA1FO60840 AL137014.1-201ENST00000420490 1226 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.81□□□□□ -1.96
CACNA1FO60840 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA1FO60840 RPL35AP22-201ENST00000436855 335 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.81□□□□□ -1.96
CACNA1FO60840 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA1FO60840 MTND3P16-201ENST00000452205 344 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.81□□□□□ -1.96
CACNA1FO60840 RPL23AP49-201ENST00000492925 468 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms