Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX3O60493 AL627311.1-201ENST00000431514 115 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RPL7P54-201ENST00000438336 674 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AL161651.1-201ENST00000440882 223 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX3O60493 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SNX3O60493 AC073415.1-201ENST00000449240 153 ntBASIC2.59□□□□□ -1.99
SNX3O60493 PSPHP1-201ENST00000450062 261 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.59□□□□□ -1.99
SNX3O60493 BTF3P15-201ENST00000455606 336 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.59□□□□□ -1.99
SNX3O60493 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX3O60493 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX3O60493 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.59□□□□□ -1.99
SNX3O60493 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.59□□□□□ -1.99
SNX3O60493 MTND3P25-201ENST00000509243 135 ntBASIC2.59□□□□□ -1.99
SNX3O60493 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RNU1-86P-201ENST00000516108 154 ntBASIC2.59□□□□□ -1.99
SNX3O60493 SNORA40.12-201ENST00000516329 111 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RNU1-107P-201ENST00000516617 154 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RNU6-1178P-201ENST00000516674 107 ntBASIC2.59□□□□□ -1.99
SNX3O60493 RNU6-56P-201ENST00000516986 93 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC009812.2-201ENST00000517657 457 ntBASIC2.59□□□□□ -1.99
SNX3O60493 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.59□□□□□ -1.99
SNX3O60493 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX3O60493 AC104383.1-201ENST00000530297 370 ntBASIC2.59□□□□□ -1.99
SNX3O60493 GLYCAM1-201ENST00000546596 285 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC092325.1-201ENST00000566449 554 ntBASIC2.59□□□□□ -1.99
SNX3O60493 EIF1P4-201ENST00000572664 335 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX3O60493 MIR3158-1-201ENST00000583596 81 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC024153.1-201ENST00000603103 365 ntBASIC2.59□□□□□ -1.99
SNX3O60493 AC092954.2-201ENST00000609103 430 ntBASIC2.59□□□□□ -1.99
SNX3O60493 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.59□□□□□ -1.99
SNX3O60493 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -2
SNX3O60493 CDC27P3-201ENST00000635418 1910 ntBASIC2.58□□□□□ -2
SNX3O60493 AC092435.3-201ENST00000565538 3654 ntBASIC2.58□□□□□ -2
SNX3O60493 RNU6-384P-201ENST00000364900 104 ntBASIC2.58□□□□□ -2
SNX3O60493 RNU6-517P-201ENST00000384362 110 ntBASIC2.58□□□□□ -2
SNX3O60493 RNU6-45P-201ENST00000384471 107 ntBASIC2.58□□□□□ -2
SNX3O60493 RNU6-780P-201ENST00000391030 104 ntBASIC2.58□□□□□ -2
SNX3O60493 AC016831.2-201ENST00000417179 352 ntBASIC2.58□□□□□ -2
SNX3O60493 AL669831.1-202ENST00000428504 417 ntBASIC2.58□□□□□ -2
SNX3O60493 GTF2IP13-201ENST00000438487 386 ntBASIC2.58□□□□□ -2
SNX3O60493 NDUFB1P2-201ENST00000449477 176 ntBASIC2.58□□□□□ -2
SNX3O60493 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.58□□□□□ -2
SNX3O60493 AL163973.1-201ENST00000484753 577 ntBASIC2.58□□□□□ -2
SNX3O60493 AC009646.1-201ENST00000510455 318 ntBASIC2.58□□□□□ -2
SNX3O60493 SCARNA17.1-201ENST00000516211 143 ntBASIC2.58□□□□□ -2
SNX3O60493 SCARNA17.2-201ENST00000516334 143 ntBASIC2.58□□□□□ -2
SNX3O60493 RNU6-506P-201ENST00000516553 94 ntBASIC2.58□□□□□ -2
SNX3O60493 SNORA67.7-201ENST00000516664 135 ntBASIC2.58□□□□□ -2
SNX3O60493 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.58□□□□□ -2
SNX3O60493 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.58□□□□□ -2
SNX3O60493 AC007151.1-201ENST00000572774 483 ntBASIC2.58□□□□□ -2
SNX3O60493 BNIP3P30-201ENST00000601184 574 ntBASIC2.58□□□□□ -2
SNX3O60493 AC091152.3-201ENST00000604227 325 ntBASIC2.58□□□□□ -2
SNX3O60493 AF250324.2-201ENST00000608299 610 ntBASIC2.58□□□□□ -2
SNX3O60493 SCARNA17.4-201ENST00000614296 143 ntBASIC2.58□□□□□ -2
SNX3O60493 AC006133.1-201ENST00000617106 264 ntBASIC2.58□□□□□ -2
SNX3O60493 AL354685.2-201ENST00000448218 1447 ntBASIC2.58□□□□□ -2
SNX3O60493 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
SNX3O60493 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SNX3O60493 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNX3O60493 ZNF519P1-201ENST00000449011 1626 ntBASIC2.57□□□□□ -2
SNX3O60493 RNU6-1085P-201ENST00000363576 107 ntBASIC2.57□□□□□ -2
SNX3O60493 Y_RNA.255-201ENST00000364581 97 ntBASIC2.57□□□□□ -2
SNX3O60493 RNU6-1127P-201ENST00000384580 107 ntBASIC2.57□□□□□ -2
SNX3O60493 MIR183-201ENST00000384958 110 ntBASIC2.57□□□□□ -2
SNX3O60493 MIR10A-201ENST00000385043 110 ntBASIC2.57□□□□□ -2
SNX3O60493 AL353621.1-201ENST00000418219 243 ntBASIC2.57□□□□□ -2
SNX3O60493 AC016691.1-201ENST00000441321 413 ntBASIC2.57□□□□□ -2
SNX3O60493 AC011816.1-201ENST00000441346 546 ntBASIC2.57□□□□□ -2
SNX3O60493 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.57□□□□□ -2
SNX3O60493 SNRPFP3-201ENST00000457792 225 ntBASIC2.57□□□□□ -2
SNX3O60493 snoU109.2-201ENST00000459316 135 ntBASIC2.57□□□□□ -2
SNX3O60493 AC073901.1-201ENST00000462471 408 ntBASIC2.57□□□□□ -2
SNX3O60493 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.57□□□□□ -2
SNX3O60493 AC083906.5-201ENST00000503722 328 ntBASIC2.57□□□□□ -2
SNX3O60493 AC019235.1-201ENST00000503847 207 ntBASIC2.57□□□□□ -2
SNX3O60493 AC104136.1-201ENST00000512969 394 ntBASIC2.57□□□□□ -2
SNX3O60493 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.57□□□□□ -2
SNX3O60493 RNA5SP282-201ENST00000516355 108 ntBASIC2.57□□□□□ -2
SNX3O60493 SNORD19.2-201ENST00000516978 73 ntBASIC2.57□□□□□ -2
SNX3O60493 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.57□□□□□ -2
SNX3O60493 AC016957.1-201ENST00000534895 309 ntBASIC2.57□□□□□ -2
SNX3O60493 HIF1AP1-201ENST00000553642 175 ntBASIC2.57□□□□□ -2
SNX3O60493 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.57□□□□□ -2
SNX3O60493 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.57□□□□□ -2
SNX3O60493 AC234778.2-201ENST00000566241 354 ntBASIC2.57□□□□□ -2
SNX3O60493 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.57□□□□□ -2
SNX3O60493 RPL23AP78-201ENST00000599928 470 ntBASIC2.57□□□□□ -2
SNX3O60493 AL391813.1-201ENST00000603098 260 ntBASIC2.57□□□□□ -2
SNX3O60493 AL049779.4-201ENST00000604500 156 ntBASIC2.57□□□□□ -2
SNX3O60493 AC012557.2-201ENST00000605919 418 ntBASIC2.57□□□□□ -2
SNX3O60493 MIR7112-201ENST00000616126 65 ntBASIC2.57□□□□□ -2
SNX3O60493 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.57□□□□□ -2
SNX3O60493 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.57□□□□□ -2
SNX3O60493 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
SNX3O60493 U6.105-201ENST00000637379 88 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms